Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01214

Experiment: PYE with Tetracycline 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Tetracycline 0.0001 mg/ml
1,340,685	-				-0.8
1,340,763	-				+1.6
1,340,768	-				-1.1
1,340,770	-				-1.0
1,340,836	+				-0.8
1,340,842	-				+1.3
1,340,844	-				-0.3
1,340,890	-				+1.4
1,341,028	-		CCNA_01214	0.20	+0.4
1,341,062	+		CCNA_01214	0.23	-0.5
1,341,296	-		CCNA_01214	0.42	-1.9
1,341,470	-		CCNA_01214	0.57	-1.7
1,341,790	-		CCNA_01214	0.83	+1.6
1,341,880	-				-1.0
1,341,964	-				-1.2
1,341,973	+				-1.2
1,341,981	-				+0.8
1,342,010	-				+1.7
1,342,013	-				-2.3
1,342,037	-				+0.7
1,342,042	-		CCNA_01215	0.11	-0.1
1,342,073	-		CCNA_01215	0.18	-0.2
1,342,083	-		CCNA_01215	0.20	+0.5
1,342,083	-		CCNA_01215	0.20	+1.1
1,342,123	-		CCNA_01215	0.29	-1.7
1,342,194	-		CCNA_01215	0.45	+1.2
1,342,242	-		CCNA_01215	0.56	-0.5
1,342,247	-		CCNA_01215	0.58	-0.1
1,342,256	+		CCNA_01215	0.60	-1.1
1,342,295	+		CCNA_01215	0.68	-0.4
1,342,303	-		CCNA_01215	0.70	+0.9
1,342,316	+		CCNA_01215	0.73	-0.5
1,342,344	+		CCNA_01215	0.80	-0.9
1,342,363	-		CCNA_01215	0.84	+0.6
1,342,368	-		CCNA_01215	0.85	+0.9
1,342,387	+		CCNA_01215	0.89	+1.2
1,342,387	+		CCNA_01215	0.89	+0.0
1,342,395	-				+2.2
1,342,395	-				-1.4
1,342,395	-				-1.0
1,342,395	-				+0.4
1,342,395	-				+0.2
1,342,395	-				+0.2
1,342,395	-				+0.2
1,342,404	+				+0.8
1,342,491	+				+0.1
1,342,496	+				-1.7
1,342,496	+				+1.0
1,342,535	+				+0.4
1,342,541	+				+1.0
1,342,546	+				-0.3
1,342,558	+				-0.9
1,342,558	+				-1.2
1,342,566	-				+0.3
1,342,566	-				-1.5
1,342,573	+				-0.5
1,342,581	-				-0.5
1,342,581	-				-2.1
1,342,610	-				+0.1
1,342,676	-		CCNA_01216	0.15	+0.2
1,342,692	+		CCNA_01216	0.17	-2.9
1,342,700	-		CCNA_01216	0.18	-0.0
1,342,720	-		CCNA_01216	0.20	-2.0
1,342,727	-		CCNA_01216	0.21	-2.1
1,342,727	-		CCNA_01216	0.21	-0.6
1,342,770	+		CCNA_01216	0.25	-0.5
1,342,783	-		CCNA_01216	0.27	-0.3
1,342,826	+		CCNA_01216	0.31	-0.5
1,342,826	+		CCNA_01216	0.31	+0.4
1,342,855	-		CCNA_01216	0.35	+0.4
1,342,877	-		CCNA_01216	0.37	-1.4
1,342,877	-		CCNA_01216	0.37	+0.7
1,342,879	-		CCNA_01216	0.37	+1.0
1,342,909	-		CCNA_01216	0.40	+0.4
1,342,914	-		CCNA_01216	0.41	-1.8
1,342,928	+		CCNA_01216	0.42	-1.1
1,342,936	-		CCNA_01216	0.43	-0.3
1,342,940	+		CCNA_01216	0.44	-2.4
1,342,946	-		CCNA_01216	0.44	-0.6
1,342,948	-		CCNA_01216	0.45	+1.2
1,342,961	-		CCNA_01216	0.46	+0.9
1,342,961	-		CCNA_01216	0.46	-0.4
1,342,967	+		CCNA_01216	0.47	-0.4
1,342,972	+		CCNA_01216	0.47	-1.3