Experiment: 5-Hydroxymethylfurfural 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_31 and Ac3H11_32 are separated by 52 nucleotides Ac3H11_32 and Ac3H11_33 are separated by 27 nucleotides Ac3H11_33 and Ac3H11_34 are separated by 148 nucleotides
Ac3H11_31 - FIG074102: hypothetical protein, at 27,840 to 28,661
_31
Ac3H11_32 - Serine esterase, at 28,714 to 29,364
_32
Ac3H11_33 - Transcriptional regulator, AsnC family, at 29,392 to 29,859
_33
Ac3H11_34 - Methionine gamma-lyase (EC 4.4.1.11), at 30,008 to 31,312
_34
Position (kb) 29
30 Strain fitness (log2 ratio) -2
-1
0
1
2 at 28.419 kb on + strand, within Ac3H11_31 at 28.419 kb on + strand, within Ac3H11_31 at 28.419 kb on + strand, within Ac3H11_31 at 28.419 kb on + strand, within Ac3H11_31 at 28.419 kb on + strand, within Ac3H11_31 at 28.419 kb on + strand, within Ac3H11_31 at 28.420 kb on - strand, within Ac3H11_31 at 28.420 kb on - strand, within Ac3H11_31 at 28.420 kb on - strand, within Ac3H11_31 at 28.420 kb on - strand, within Ac3H11_31 at 28.420 kb on - strand, within Ac3H11_31 at 28.488 kb on + strand, within Ac3H11_31 at 28.488 kb on + strand, within Ac3H11_31 at 28.488 kb on + strand, within Ac3H11_31 at 28.489 kb on - strand, within Ac3H11_31 at 28.593 kb on + strand at 28.593 kb on + strand at 28.593 kb on + strand at 28.593 kb on + strand at 28.593 kb on + strand at 28.593 kb on + strand at 28.593 kb on + strand at 28.593 kb on + strand at 28.594 kb on - strand at 28.594 kb on - strand at 28.594 kb on - strand at 28.594 kb on - strand at 28.594 kb on - strand at 28.594 kb on - strand at 28.594 kb on - strand at 28.594 kb on - strand at 28.614 kb on + strand at 28.614 kb on + strand at 28.614 kb on + strand at 28.614 kb on + strand at 28.614 kb on + strand at 28.614 kb on + strand at 28.614 kb on + strand at 28.614 kb on + strand at 28.614 kb on + strand at 28.614 kb on + strand at 28.614 kb on + strand at 28.614 kb on + strand at 28.615 kb on - strand at 28.615 kb on - strand at 28.615 kb on - strand at 28.615 kb on - strand at 28.615 kb on - strand at 28.615 kb on - strand at 28.615 kb on - strand at 28.615 kb on - strand at 28.615 kb on - strand at 28.615 kb on - strand at 28.615 kb on - strand at 28.615 kb on - strand at 28.615 kb on - strand at 28.615 kb on - strand at 28.615 kb on - strand at 28.615 kb on - strand at 28.615 kb on - strand at 28.615 kb on - strand at 28.686 kb on - strand at 28.686 kb on - strand at 28.713 kb on + strand at 28.714 kb on - strand at 29.287 kb on + strand, within Ac3H11_32 at 29.287 kb on + strand, within Ac3H11_32 at 29.287 kb on + strand, within Ac3H11_32 at 29.287 kb on + strand, within Ac3H11_32 at 29.288 kb on - strand, within Ac3H11_32 at 29.473 kb on + strand, within Ac3H11_33 at 29.473 kb on + strand, within Ac3H11_33 at 29.473 kb on + strand, within Ac3H11_33 at 29.473 kb on + strand, within Ac3H11_33 at 29.473 kb on + strand, within Ac3H11_33 at 29.473 kb on + strand, within Ac3H11_33 at 29.473 kb on + strand, within Ac3H11_33 at 29.473 kb on + strand, within Ac3H11_33 at 29.473 kb on + strand, within Ac3H11_33 at 29.473 kb on + strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.489 kb on + strand, within Ac3H11_33 at 29.489 kb on + strand, within Ac3H11_33 at 29.489 kb on + strand, within Ac3H11_33 at 29.490 kb on - strand, within Ac3H11_33 at 29.490 kb on - strand, within Ac3H11_33 at 29.490 kb on - strand, within Ac3H11_33 at 29.490 kb on - strand, within Ac3H11_33 at 29.534 kb on + strand, within Ac3H11_33 at 29.534 kb on + strand, within Ac3H11_33 at 29.534 kb on + strand, within Ac3H11_33 at 29.534 kb on + strand, within Ac3H11_33 at 29.534 kb on + strand, within Ac3H11_33 at 29.534 kb on + strand, within Ac3H11_33 at 29.535 kb on - strand, within Ac3H11_33 at 29.540 kb on + strand, within Ac3H11_33 at 29.541 kb on - strand, within Ac3H11_33 at 29.859 kb on + strand at 29.859 kb on + strand at 29.859 kb on + strand at 29.859 kb on + strand at 29.859 kb on + strand at 29.859 kb on + strand at 29.859 kb on + strand at 29.859 kb on + strand at 29.859 kb on + strand at 29.859 kb on + strand at 29.860 kb on - strand at 29.860 kb on - strand at 29.860 kb on - strand at 30.071 kb on + strand at 30.072 kb on - strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.149 kb on + strand, within Ac3H11_34 at 30.150 kb on - strand, within Ac3H11_34 at 30.185 kb on + strand, within Ac3H11_34 at 30.185 kb on + strand, within Ac3H11_34 at 30.185 kb on + strand, within Ac3H11_34 at 30.185 kb on + strand, within Ac3H11_34 at 30.185 kb on + strand, within Ac3H11_34 at 30.185 kb on + strand, within Ac3H11_34 at 30.186 kb on - strand, within Ac3H11_34 at 30.186 kb on - strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.192 kb on - strand, within Ac3H11_34 at 30.192 kb on - strand, within Ac3H11_34 at 30.192 kb on - strand, within Ac3H11_34 at 30.192 kb on - strand, within Ac3H11_34 at 30.192 kb on - strand, within Ac3H11_34 at 30.192 kb on - strand, within Ac3H11_34 at 30.192 kb on - strand, within Ac3H11_34 at 30.192 kb on - strand, within Ac3H11_34 at 30.192 kb on - strand, within Ac3H11_34 at 30.192 kb on - strand, within Ac3H11_34 at 30.192 kb on - strand, within Ac3H11_34 at 30.356 kb on + strand, within Ac3H11_34 at 30.356 kb on + strand, within Ac3H11_34 at 30.356 kb on + strand, within Ac3H11_34 at 30.356 kb on + strand, within Ac3H11_34 at 30.357 kb on - strand, within Ac3H11_34 at 30.479 kb on + strand, within Ac3H11_34 at 30.480 kb on - strand, within Ac3H11_34 at 30.574 kb on + strand, within Ac3H11_34 at 30.575 kb on - strand, within Ac3H11_34 at 30.581 kb on + strand, within Ac3H11_34 at 30.581 kb on + strand, within Ac3H11_34 at 30.581 kb on + strand, within Ac3H11_34 at 30.581 kb on + strand, within Ac3H11_34 at 30.581 kb on + strand, within Ac3H11_34 at 30.581 kb on + strand, within Ac3H11_34 at 30.581 kb on + strand, within Ac3H11_34 at 30.581 kb on + strand, within Ac3H11_34 at 30.581 kb on + strand, within Ac3H11_34 at 30.582 kb on - strand, within Ac3H11_34 at 30.582 kb on - strand, within Ac3H11_34 at 30.582 kb on - strand, within Ac3H11_34 at 30.582 kb on - strand, within Ac3H11_34 at 30.582 kb on - strand, within Ac3H11_34 at 30.582 kb on - strand, within Ac3H11_34 at 30.582 kb on - strand, within Ac3H11_34 at 30.593 kb on + strand, within Ac3H11_34 at 30.594 kb on - strand, within Ac3H11_34 at 30.594 kb on - strand, within Ac3H11_34 at 30.594 kb on - strand, within Ac3H11_34 at 30.594 kb on - strand, within Ac3H11_34 at 30.594 kb on - strand, within Ac3H11_34 at 30.650 kb on + strand, within Ac3H11_34 at 30.650 kb on + strand, within Ac3H11_34 at 30.650 kb on + strand, within Ac3H11_34 at 30.650 kb on + strand, within Ac3H11_34 at 30.650 kb on + strand, within Ac3H11_34 at 30.650 kb on + strand, within Ac3H11_34 at 30.650 kb on + strand, within Ac3H11_34 at 30.650 kb on + strand, within Ac3H11_34 at 30.650 kb on + strand, within Ac3H11_34 at 30.650 kb on + strand, within Ac3H11_34 at 30.650 kb on + strand, within Ac3H11_34 at 30.651 kb on - strand, within Ac3H11_34 at 30.651 kb on - strand, within Ac3H11_34 at 30.651 kb on - strand, within Ac3H11_34 at 30.728 kb on + strand, within Ac3H11_34 at 30.728 kb on + strand, within Ac3H11_34 at 30.729 kb on - strand, within Ac3H11_34
Per-strain Table
Position Strand Gene LocusTag Fraction 5-Hydroxymethylfurfural 5 mM remove 28,419 + Ac3H11_31 0.70 +0.5 28,419 + Ac3H11_31 0.70 +0.3 28,419 + Ac3H11_31 0.70 +0.0 28,419 + Ac3H11_31 0.70 +0.5 28,419 + Ac3H11_31 0.70 -1.0 28,419 + Ac3H11_31 0.70 +0.4 28,420 - Ac3H11_31 0.71 +0.7 28,420 - Ac3H11_31 0.71 -0.2 28,420 - Ac3H11_31 0.71 +0.6 28,420 - Ac3H11_31 0.71 -1.3 28,420 - Ac3H11_31 0.71 +0.5 28,488 + Ac3H11_31 0.79 +0.4 28,488 + Ac3H11_31 0.79 -0.8 28,488 + Ac3H11_31 0.79 +0.3 28,489 - Ac3H11_31 0.79 -0.3 28,593 + -0.4 28,593 + +1.3 28,593 + +0.1 28,593 + +0.7 28,593 + +0.9 28,593 + +0.1 28,593 + +0.2 28,593 + -0.4 28,594 - +0.0 28,594 - +0.8 28,594 - +0.7 28,594 - +0.7 28,594 - -0.5 28,594 - +0.4 28,594 - +0.8 28,594 - +1.0 28,614 + -1.2 28,614 + +0.0 28,614 + -0.5 28,614 + +0.2 28,614 + +0.4 28,614 + -0.2 28,614 + -0.5 28,614 + -0.1 28,614 + -0.5 28,614 + -0.5 28,614 + -0.8 28,614 + +1.5 28,615 - -0.1 28,615 - +0.4 28,615 - +0.5 28,615 - -1.0 28,615 - +0.9 28,615 - -0.8 28,615 - +0.3 28,615 - -0.2 28,615 - +0.8 28,615 - -0.0 28,615 - -1.7 28,615 - +1.9 28,615 - -0.8 28,615 - +0.5 28,615 - +1.0 28,615 - +0.3 28,615 - +0.3 28,615 - +0.7 28,686 - -0.5 28,686 - +0.3 28,713 + +0.4 28,714 - -0.1 29,287 + Ac3H11_32 0.88 -0.9 29,287 + Ac3H11_32 0.88 +0.3 29,287 + Ac3H11_32 0.88 +0.0 29,287 + Ac3H11_32 0.88 -0.0 29,288 - Ac3H11_32 0.88 -0.8 29,473 + Ac3H11_33 0.17 +0.6 29,473 + Ac3H11_33 0.17 -0.5 29,473 + Ac3H11_33 0.17 -0.6 29,473 + Ac3H11_33 0.17 +0.0 29,473 + Ac3H11_33 0.17 -0.6 29,473 + Ac3H11_33 0.17 -0.0 29,473 + Ac3H11_33 0.17 -0.6 29,473 + Ac3H11_33 0.17 -0.7 29,473 + Ac3H11_33 0.17 +0.5 29,473 + Ac3H11_33 0.17 -0.0 29,474 - Ac3H11_33 0.18 -0.5 29,474 - Ac3H11_33 0.18 +0.7 29,474 - Ac3H11_33 0.18 +0.4 29,474 - Ac3H11_33 0.18 -0.7 29,474 - Ac3H11_33 0.18 +0.2 29,474 - Ac3H11_33 0.18 +0.7 29,474 - Ac3H11_33 0.18 +0.8 29,474 - Ac3H11_33 0.18 +0.3 29,474 - Ac3H11_33 0.18 -0.1 29,474 - Ac3H11_33 0.18 +0.6 29,474 - Ac3H11_33 0.18 +0.8 29,474 - Ac3H11_33 0.18 -0.7 29,474 - Ac3H11_33 0.18 +0.1 29,474 - Ac3H11_33 0.18 +0.3 29,474 - Ac3H11_33 0.18 -0.1 29,474 - Ac3H11_33 0.18 +0.2 29,474 - Ac3H11_33 0.18 +0.9 29,474 - Ac3H11_33 0.18 -0.3 29,474 - Ac3H11_33 0.18 -0.1 29,474 - Ac3H11_33 0.18 +0.0 29,489 + Ac3H11_33 0.21 +1.3 29,489 + Ac3H11_33 0.21 +0.3 29,489 + Ac3H11_33 0.21 +0.1 29,490 - Ac3H11_33 0.21 -0.2 29,490 - Ac3H11_33 0.21 +0.4 29,490 - Ac3H11_33 0.21 -0.1 29,490 - Ac3H11_33 0.21 +0.3 29,534 + Ac3H11_33 0.30 -0.4 29,534 + Ac3H11_33 0.30 +0.3 29,534 + Ac3H11_33 0.30 -1.1 29,534 + Ac3H11_33 0.30 +0.5 29,534 + Ac3H11_33 0.30 -0.3 29,534 + Ac3H11_33 0.30 -0.2 29,535 - Ac3H11_33 0.31 +0.5 29,540 + Ac3H11_33 0.32 -0.3 29,541 - Ac3H11_33 0.32 -0.2 29,859 + +0.3 29,859 + -0.2 29,859 + +0.5 29,859 + +1.2 29,859 + +0.7 29,859 + -0.8 29,859 + -0.8 29,859 + +0.3 29,859 + +0.9 29,859 + -0.6 29,860 - +0.1 29,860 - -1.0 29,860 - +0.1 30,071 + -0.5 30,072 - +0.3 30,128 + -0.1 30,128 + -0.5 30,128 + -1.9 30,128 + +0.2 30,128 + -0.0 30,128 + -0.9 30,128 + -0.6 30,128 + -0.9 30,128 + +1.3 30,128 + +0.3 30,128 + -0.3 30,128 + +0.1 30,128 + +0.4 30,128 + -1.5 30,128 + +0.1 30,128 + -0.5 30,128 + +0.3 30,128 + -0.5 30,128 + +0.0 30,128 + -0.5 30,128 + +1.5 30,129 - +0.3 30,129 - -0.1 30,129 - +0.7 30,129 - -0.1 30,129 - +0.6 30,129 - +0.6 30,129 - +0.3 30,129 - -1.4 30,129 - -0.3 30,129 - +0.3 30,129 - -0.6 30,129 - -1.0 30,129 - -0.4 30,129 - -0.1 30,149 + Ac3H11_34 0.11 +0.2 30,150 - Ac3H11_34 0.11 +0.3 30,185 + Ac3H11_34 0.14 +0.7 30,185 + Ac3H11_34 0.14 +1.3 30,185 + Ac3H11_34 0.14 -0.9 30,185 + Ac3H11_34 0.14 -0.2 30,185 + Ac3H11_34 0.14 +0.2 30,185 + Ac3H11_34 0.14 +0.5 30,186 - Ac3H11_34 0.14 +0.9 30,186 - Ac3H11_34 0.14 -1.4 30,191 + Ac3H11_34 0.14 -0.6 30,191 + Ac3H11_34 0.14 +0.5 30,191 + Ac3H11_34 0.14 -0.0 30,191 + Ac3H11_34 0.14 -0.5 30,191 + Ac3H11_34 0.14 +0.3 30,191 + Ac3H11_34 0.14 -0.1 30,191 + Ac3H11_34 0.14 +0.5 30,191 + Ac3H11_34 0.14 +0.6 30,191 + Ac3H11_34 0.14 +0.2 30,191 + Ac3H11_34 0.14 +0.3 30,191 + Ac3H11_34 0.14 +0.9 30,191 + Ac3H11_34 0.14 +0.1 30,191 + Ac3H11_34 0.14 -0.0 30,191 + Ac3H11_34 0.14 -0.8 30,192 - Ac3H11_34 0.14 -1.6 30,192 - Ac3H11_34 0.14 +0.9 30,192 - Ac3H11_34 0.14 -0.5 30,192 - Ac3H11_34 0.14 -0.4 30,192 - Ac3H11_34 0.14 -0.1 30,192 - Ac3H11_34 0.14 -0.3 30,192 - Ac3H11_34 0.14 +0.7 30,192 - Ac3H11_34 0.14 -0.6 30,192 - Ac3H11_34 0.14 +0.6 30,192 - Ac3H11_34 0.14 -0.3 30,192 - Ac3H11_34 0.14 +0.7 30,356 + Ac3H11_34 0.27 +0.9 30,356 + Ac3H11_34 0.27 +1.0 30,356 + Ac3H11_34 0.27 +0.2 30,356 + Ac3H11_34 0.27 +0.3 30,357 - Ac3H11_34 0.27 +0.1 30,479 + Ac3H11_34 0.36 -0.5 30,480 - Ac3H11_34 0.36 +1.0 30,574 + Ac3H11_34 0.43 -0.1 30,575 - Ac3H11_34 0.43 +0.6 30,581 + Ac3H11_34 0.44 +1.1 30,581 + Ac3H11_34 0.44 +0.6 30,581 + Ac3H11_34 0.44 +0.7 30,581 + Ac3H11_34 0.44 +0.3 30,581 + Ac3H11_34 0.44 +0.7 30,581 + Ac3H11_34 0.44 -0.6 30,581 + Ac3H11_34 0.44 -0.1 30,581 + Ac3H11_34 0.44 +0.1 30,581 + Ac3H11_34 0.44 -1.4 30,582 - Ac3H11_34 0.44 -0.5 30,582 - Ac3H11_34 0.44 -0.0 30,582 - Ac3H11_34 0.44 -0.1 30,582 - Ac3H11_34 0.44 -0.8 30,582 - Ac3H11_34 0.44 +0.3 30,582 - Ac3H11_34 0.44 -0.0 30,582 - Ac3H11_34 0.44 +0.8 30,593 + Ac3H11_34 0.45 +0.1 30,594 - Ac3H11_34 0.45 +0.1 30,594 - Ac3H11_34 0.45 +1.5 30,594 - Ac3H11_34 0.45 +0.5 30,594 - Ac3H11_34 0.45 +0.1 30,594 - Ac3H11_34 0.45 -0.5 30,650 + Ac3H11_34 0.49 +0.5 30,650 + Ac3H11_34 0.49 -1.1 30,650 + Ac3H11_34 0.49 -0.1 30,650 + Ac3H11_34 0.49 +0.6 30,650 + Ac3H11_34 0.49 -1.1 30,650 + Ac3H11_34 0.49 +0.1 30,650 + Ac3H11_34 0.49 -0.7 30,650 + Ac3H11_34 0.49 +0.6 30,650 + Ac3H11_34 0.49 +0.5 30,650 + Ac3H11_34 0.49 +0.2 30,650 + Ac3H11_34 0.49 -0.5 30,651 - Ac3H11_34 0.49 -1.0 30,651 - Ac3H11_34 0.49 +0.2 30,651 - Ac3H11_34 0.49 +0.9 30,728 + Ac3H11_34 0.55 +0.2 30,728 + Ac3H11_34 0.55 +0.9 30,729 - Ac3H11_34 0.55 -0.1
Or see this region's nucleotide sequence