Experiment: L-Threonine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26205 and AZOBR_RS26210 overlap by 1 nucleotides
AZOBR_RS26205: AZOBR_RS26205 - conserved exported protein of unknown function, at 25,857 to 27,068
_RS26205
AZOBR_RS26210: AZOBR_RS26210 - curdlan Synthase, at 27,068 to 29,047
_RS26210
Position (kb) 25
26
27
28 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 24.910 kb on - strand at 24.921 kb on - strand at 24.931 kb on + strand at 24.932 kb on - strand at 25.152 kb on - strand at 25.152 kb on - strand at 25.153 kb on + strand at 25.154 kb on - strand at 25.206 kb on + strand at 25.251 kb on + strand at 25.252 kb on - strand at 25.252 kb on - strand at 25.498 kb on + strand at 25.498 kb on + strand at 25.498 kb on + strand at 25.498 kb on + strand at 25.499 kb on - strand at 25.499 kb on - strand at 25.499 kb on - strand at 25.499 kb on - strand at 25.564 kb on + strand at 25.564 kb on + strand at 25.564 kb on + strand at 25.565 kb on - strand at 25.565 kb on - strand at 25.565 kb on - strand at 25.565 kb on - strand at 25.703 kb on + strand at 25.703 kb on + strand at 25.786 kb on + strand at 25.787 kb on - strand at 25.791 kb on + strand at 25.814 kb on + strand at 25.840 kb on + strand at 25.911 kb on + strand at 25.911 kb on + strand at 25.911 kb on + strand at 25.912 kb on - strand at 25.912 kb on - strand at 25.912 kb on - strand at 25.962 kb on - strand at 25.991 kb on + strand, within AZOBR_RS26205 at 25.991 kb on + strand, within AZOBR_RS26205 at 25.991 kb on + strand, within AZOBR_RS26205 at 25.991 kb on + strand, within AZOBR_RS26205 at 25.991 kb on + strand, within AZOBR_RS26205 at 25.992 kb on - strand, within AZOBR_RS26205 at 25.992 kb on - strand, within AZOBR_RS26205 at 26.481 kb on + strand, within AZOBR_RS26205 at 26.482 kb on - strand, within AZOBR_RS26205 at 26.482 kb on - strand, within AZOBR_RS26205 at 26.497 kb on - strand, within AZOBR_RS26205 at 26.694 kb on + strand, within AZOBR_RS26205 at 26.695 kb on - strand, within AZOBR_RS26205 at 26.775 kb on + strand, within AZOBR_RS26205 at 26.775 kb on + strand, within AZOBR_RS26205 at 26.776 kb on - strand, within AZOBR_RS26205 at 26.776 kb on - strand, within AZOBR_RS26205 at 26.776 kb on - strand, within AZOBR_RS26205 at 26.884 kb on - strand, within AZOBR_RS26205 at 26.884 kb on - strand, within AZOBR_RS26205 at 27.212 kb on + strand at 27.212 kb on + strand at 27.213 kb on - strand at 27.216 kb on + strand at 27.216 kb on + strand at 27.216 kb on + strand at 27.216 kb on + strand at 27.216 kb on + strand at 27.217 kb on - strand at 27.217 kb on - strand at 27.217 kb on - strand at 27.217 kb on - strand at 27.217 kb on - strand at 27.217 kb on - strand at 27.217 kb on - strand at 27.217 kb on - strand at 27.217 kb on - strand at 27.217 kb on - strand at 27.217 kb on - strand at 27.217 kb on - strand at 27.217 kb on - strand at 27.217 kb on - strand at 27.217 kb on - strand at 27.434 kb on + strand, within AZOBR_RS26210 at 27.434 kb on + strand, within AZOBR_RS26210 at 27.434 kb on + strand, within AZOBR_RS26210 at 27.434 kb on + strand, within AZOBR_RS26210 at 27.435 kb on - strand, within AZOBR_RS26210 at 27.435 kb on - strand, within AZOBR_RS26210 at 27.435 kb on - strand, within AZOBR_RS26210 at 27.435 kb on - strand, within AZOBR_RS26210 at 27.573 kb on - strand, within AZOBR_RS26210 at 27.818 kb on + strand, within AZOBR_RS26210 at 28.014 kb on - strand, within AZOBR_RS26210 at 28.064 kb on + strand, within AZOBR_RS26210 at 28.064 kb on + strand, within AZOBR_RS26210 at 28.064 kb on + strand, within AZOBR_RS26210 at 28.065 kb on - strand, within AZOBR_RS26210 at 28.065 kb on - strand, within AZOBR_RS26210
Per-strain Table
Position Strand Gene LocusTag Fraction L-Threonine (N) remove 24,910 - +1.1 24,921 - -1.2 24,931 + -1.4 24,932 - +0.4 25,152 - -1.9 25,152 - -2.0 25,153 + +0.4 25,154 - +0.4 25,206 + +0.1 25,251 + -0.6 25,252 - +1.3 25,252 - -3.4 25,498 + -0.5 25,498 + -0.5 25,498 + +0.5 25,498 + +0.1 25,499 - +1.5 25,499 - -0.1 25,499 - +0.9 25,499 - -0.6 25,564 + -1.5 25,564 + -0.3 25,564 + -1.6 25,565 - +1.7 25,565 - -0.4 25,565 - +0.5 25,565 - +0.1 25,703 + +0.1 25,703 + +0.8 25,786 + -3.3 25,787 - -0.9 25,791 + -1.2 25,814 + -0.2 25,840 + +0.5 25,911 + -3.0 25,911 + +1.1 25,911 + -0.5 25,912 - -0.3 25,912 - -0.2 25,912 - +0.2 25,962 - +0.4 25,991 + AZOBR_RS26205 0.11 -2.8 25,991 + AZOBR_RS26205 0.11 +0.6 25,991 + AZOBR_RS26205 0.11 -1.3 25,991 + AZOBR_RS26205 0.11 -0.2 25,991 + AZOBR_RS26205 0.11 -1.3 25,992 - AZOBR_RS26205 0.11 -2.9 25,992 - AZOBR_RS26205 0.11 -1.7 26,481 + AZOBR_RS26205 0.51 -0.3 26,482 - AZOBR_RS26205 0.52 -0.3 26,482 - AZOBR_RS26205 0.52 -2.2 26,497 - AZOBR_RS26205 0.53 -2.3 26,694 + AZOBR_RS26205 0.69 +0.5 26,695 - AZOBR_RS26205 0.69 -0.4 26,775 + AZOBR_RS26205 0.76 -0.5 26,775 + AZOBR_RS26205 0.76 -1.0 26,776 - AZOBR_RS26205 0.76 +1.7 26,776 - AZOBR_RS26205 0.76 -0.7 26,776 - AZOBR_RS26205 0.76 -1.9 26,884 - AZOBR_RS26205 0.85 +0.0 26,884 - AZOBR_RS26205 0.85 -0.6 27,212 + -0.8 27,212 + +1.6 27,213 - +0.1 27,216 + -1.6 27,216 + -0.9 27,216 + -0.3 27,216 + -0.2 27,216 + +1.0 27,217 - -0.1 27,217 - -1.5 27,217 - -0.5 27,217 - +0.6 27,217 - -1.3 27,217 - +2.7 27,217 - -1.2 27,217 - -2.3 27,217 - -0.6 27,217 - +0.6 27,217 - +0.4 27,217 - -0.8 27,217 - -0.4 27,217 - -0.2 27,217 - +0.4 27,434 + AZOBR_RS26210 0.18 -0.4 27,434 + AZOBR_RS26210 0.18 +0.0 27,434 + AZOBR_RS26210 0.18 +0.3 27,434 + AZOBR_RS26210 0.18 +0.9 27,435 - AZOBR_RS26210 0.19 +0.3 27,435 - AZOBR_RS26210 0.19 +0.1 27,435 - AZOBR_RS26210 0.19 +0.7 27,435 - AZOBR_RS26210 0.19 -2.5 27,573 - AZOBR_RS26210 0.26 -1.0 27,818 + AZOBR_RS26210 0.38 +0.5 28,014 - AZOBR_RS26210 0.48 -0.7 28,064 + AZOBR_RS26210 0.50 +1.0 28,064 + AZOBR_RS26210 0.50 -0.2 28,064 + AZOBR_RS26210 0.50 -0.0 28,065 - AZOBR_RS26210 0.50 -0.5 28,065 - AZOBR_RS26210 0.50 -0.7
Or see this region's nucleotide sequence