Experiment: L-Threonine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS24250 and AZOBR_RS24255 are separated by 23 nucleotides AZOBR_RS24255 and AZOBR_RS24260 are separated by 26 nucleotides
AZOBR_RS24250: AZOBR_RS24250 - methylmalonyl-CoA mutase, at 484,648 to 486,846
_RS24250
AZOBR_RS24255: AZOBR_RS24255 - adenosylcobalamin-dependent methylmalonyl-CoA mutase small subunit (MCM-beta)(C-terminal fragment), at 486,870 to 487,457
_RS24255
AZOBR_RS24260: AZOBR_RS24260 - methylmalonyl-CoA mutase, at 487,484 to 488,896
_RS24260
Position (kb) 486
487
488 Strain fitness (log2 ratio) -2
-1
0
1
2 at 486.041 kb on + strand, within AZOBR_RS24250 at 486.042 kb on - strand, within AZOBR_RS24250 at 486.066 kb on - strand, within AZOBR_RS24250 at 486.066 kb on - strand, within AZOBR_RS24250 at 486.204 kb on - strand, within AZOBR_RS24250 at 486.210 kb on - strand, within AZOBR_RS24250 at 486.210 kb on - strand, within AZOBR_RS24250 at 486.210 kb on - strand, within AZOBR_RS24250 at 486.210 kb on - strand, within AZOBR_RS24250 at 486.210 kb on - strand, within AZOBR_RS24250 at 486.210 kb on - strand, within AZOBR_RS24250 at 486.210 kb on - strand, within AZOBR_RS24250 at 486.210 kb on - strand, within AZOBR_RS24250 at 486.210 kb on - strand, within AZOBR_RS24250 at 486.210 kb on - strand, within AZOBR_RS24250 at 486.305 kb on + strand, within AZOBR_RS24250 at 486.306 kb on - strand, within AZOBR_RS24250 at 486.464 kb on + strand, within AZOBR_RS24250 at 486.602 kb on + strand, within AZOBR_RS24250 at 486.602 kb on + strand, within AZOBR_RS24250 at 486.602 kb on + strand, within AZOBR_RS24250 at 486.602 kb on + strand, within AZOBR_RS24250 at 486.602 kb on + strand, within AZOBR_RS24250 at 486.602 kb on + strand, within AZOBR_RS24250 at 486.602 kb on + strand, within AZOBR_RS24250 at 486.602 kb on + strand, within AZOBR_RS24250 at 486.602 kb on + strand, within AZOBR_RS24250 at 486.602 kb on + strand, within AZOBR_RS24250 at 486.602 kb on + strand, within AZOBR_RS24250 at 486.602 kb on + strand, within AZOBR_RS24250 at 486.603 kb on - strand, within AZOBR_RS24250 at 486.603 kb on - strand, within AZOBR_RS24250 at 486.603 kb on - strand, within AZOBR_RS24250 at 486.603 kb on - strand, within AZOBR_RS24250 at 486.689 kb on + strand at 486.690 kb on - strand at 486.690 kb on - strand at 486.690 kb on - strand at 486.690 kb on - strand at 487.060 kb on + strand, within AZOBR_RS24255 at 487.060 kb on + strand, within AZOBR_RS24255 at 487.060 kb on + strand, within AZOBR_RS24255 at 487.061 kb on - strand, within AZOBR_RS24255 at 487.195 kb on + strand, within AZOBR_RS24255 at 487.195 kb on + strand, within AZOBR_RS24255 at 487.196 kb on - strand, within AZOBR_RS24255 at 487.196 kb on - strand, within AZOBR_RS24255 at 487.711 kb on - strand, within AZOBR_RS24260 at 488.066 kb on + strand, within AZOBR_RS24260 at 488.133 kb on + strand, within AZOBR_RS24260 at 488.133 kb on + strand, within AZOBR_RS24260 at 488.134 kb on - strand, within AZOBR_RS24260 at 488.134 kb on - strand, within AZOBR_RS24260
Per-strain Table
Position Strand Gene LocusTag Fraction L-Threonine (N) remove 486,041 + AZOBR_RS24250 0.63 -0.2 486,042 - AZOBR_RS24250 0.63 -0.4 486,066 - AZOBR_RS24250 0.64 -0.1 486,066 - AZOBR_RS24250 0.64 +0.4 486,204 - AZOBR_RS24250 0.71 -0.6 486,210 - AZOBR_RS24250 0.71 -0.3 486,210 - AZOBR_RS24250 0.71 +0.0 486,210 - AZOBR_RS24250 0.71 +0.9 486,210 - AZOBR_RS24250 0.71 -0.2 486,210 - AZOBR_RS24250 0.71 -1.6 486,210 - AZOBR_RS24250 0.71 +0.4 486,210 - AZOBR_RS24250 0.71 -1.3 486,210 - AZOBR_RS24250 0.71 -0.1 486,210 - AZOBR_RS24250 0.71 +0.0 486,210 - AZOBR_RS24250 0.71 +2.2 486,305 + AZOBR_RS24250 0.75 +0.2 486,306 - AZOBR_RS24250 0.75 +0.5 486,464 + AZOBR_RS24250 0.83 -0.5 486,602 + AZOBR_RS24250 0.89 -0.7 486,602 + AZOBR_RS24250 0.89 -0.8 486,602 + AZOBR_RS24250 0.89 -1.5 486,602 + AZOBR_RS24250 0.89 +0.7 486,602 + AZOBR_RS24250 0.89 +0.4 486,602 + AZOBR_RS24250 0.89 +0.1 486,602 + AZOBR_RS24250 0.89 -0.2 486,602 + AZOBR_RS24250 0.89 +0.0 486,602 + AZOBR_RS24250 0.89 -0.7 486,602 + AZOBR_RS24250 0.89 -0.7 486,602 + AZOBR_RS24250 0.89 +1.7 486,602 + AZOBR_RS24250 0.89 -0.8 486,603 - AZOBR_RS24250 0.89 -1.4 486,603 - AZOBR_RS24250 0.89 -0.6 486,603 - AZOBR_RS24250 0.89 -0.9 486,603 - AZOBR_RS24250 0.89 -1.9 486,689 + -0.3 486,690 - +0.3 486,690 - -0.9 486,690 - +0.2 486,690 - -0.9 487,060 + AZOBR_RS24255 0.32 -1.3 487,060 + AZOBR_RS24255 0.32 -0.8 487,060 + AZOBR_RS24255 0.32 +0.7 487,061 - AZOBR_RS24255 0.32 +0.3 487,195 + AZOBR_RS24255 0.55 -0.6 487,195 + AZOBR_RS24255 0.55 -0.2 487,196 - AZOBR_RS24255 0.55 +1.0 487,196 - AZOBR_RS24255 0.55 -0.7 487,711 - AZOBR_RS24260 0.16 -0.3 488,066 + AZOBR_RS24260 0.41 -0.6 488,133 + AZOBR_RS24260 0.46 -0.7 488,133 + AZOBR_RS24260 0.46 -0.2 488,134 - AZOBR_RS24260 0.46 +0.6 488,134 - AZOBR_RS24260 0.46 -0.1
Or see this region's nucleotide sequence