Experiment: L-Threonine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS22485 and AZOBR_RS22490 are separated by 357 nucleotides AZOBR_RS22490 and AZOBR_RS22495 are separated by 35 nucleotides
AZOBR_RS22485: AZOBR_RS22485 - hypothetical protein, at 55,962 to 56,666
_RS22485
AZOBR_RS22490: AZOBR_RS22490 - conserved hypothetical protein with CBS domain, at 57,024 to 57,710
_RS22490
AZOBR_RS22495: AZOBR_RS22495 - GntR family transcriptional regulator, at 57,746 to 58,432
_RS22495
Position (kb) 57
58 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 56.151 kb on + strand, within AZOBR_RS22485 at 56.152 kb on - strand, within AZOBR_RS22485 at 56.169 kb on + strand, within AZOBR_RS22485 at 56.463 kb on + strand, within AZOBR_RS22485 at 56.464 kb on - strand, within AZOBR_RS22485 at 56.464 kb on - strand, within AZOBR_RS22485 at 56.464 kb on - strand, within AZOBR_RS22485 at 56.488 kb on - strand, within AZOBR_RS22485 at 56.488 kb on - strand, within AZOBR_RS22485 at 56.939 kb on + strand at 57.810 kb on - strand at 57.810 kb on - strand at 57.848 kb on + strand, within AZOBR_RS22495 at 57.848 kb on + strand, within AZOBR_RS22495 at 57.848 kb on + strand, within AZOBR_RS22495 at 57.848 kb on + strand, within AZOBR_RS22495 at 57.848 kb on + strand, within AZOBR_RS22495 at 57.848 kb on + strand, within AZOBR_RS22495 at 57.848 kb on + strand, within AZOBR_RS22495 at 57.848 kb on + strand, within AZOBR_RS22495 at 57.848 kb on + strand, within AZOBR_RS22495 at 57.849 kb on - strand, within AZOBR_RS22495 at 57.849 kb on - strand, within AZOBR_RS22495 at 57.849 kb on - strand, within AZOBR_RS22495 at 57.849 kb on - strand, within AZOBR_RS22495 at 57.849 kb on - strand, within AZOBR_RS22495 at 57.849 kb on - strand, within AZOBR_RS22495 at 57.961 kb on - strand, within AZOBR_RS22495 at 57.986 kb on + strand, within AZOBR_RS22495 at 57.987 kb on - strand, within AZOBR_RS22495 at 58.151 kb on - strand, within AZOBR_RS22495 at 58.161 kb on - strand, within AZOBR_RS22495 at 58.502 kb on + strand at 58.502 kb on + strand at 58.502 kb on + strand at 58.502 kb on + strand at 58.502 kb on + strand at 58.502 kb on + strand at 58.503 kb on - strand at 58.503 kb on - strand at 58.527 kb on + strand at 58.528 kb on - strand at 58.687 kb on - strand at 58.687 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Threonine (N) remove 56,151 + AZOBR_RS22485 0.27 -0.9 56,152 - AZOBR_RS22485 0.27 -0.4 56,169 + AZOBR_RS22485 0.29 +1.4 56,463 + AZOBR_RS22485 0.71 +0.0 56,464 - AZOBR_RS22485 0.71 -0.4 56,464 - AZOBR_RS22485 0.71 -0.1 56,464 - AZOBR_RS22485 0.71 -1.6 56,488 - AZOBR_RS22485 0.75 -2.7 56,488 - AZOBR_RS22485 0.75 -1.6 56,939 + -0.5 57,810 - +1.4 57,810 - -0.5 57,848 + AZOBR_RS22495 0.15 -0.9 57,848 + AZOBR_RS22495 0.15 -1.9 57,848 + AZOBR_RS22495 0.15 +0.3 57,848 + AZOBR_RS22495 0.15 +0.0 57,848 + AZOBR_RS22495 0.15 +1.0 57,848 + AZOBR_RS22495 0.15 +0.2 57,848 + AZOBR_RS22495 0.15 +0.7 57,848 + AZOBR_RS22495 0.15 -3.4 57,848 + AZOBR_RS22495 0.15 -1.0 57,849 - AZOBR_RS22495 0.15 -0.6 57,849 - AZOBR_RS22495 0.15 +0.4 57,849 - AZOBR_RS22495 0.15 -0.1 57,849 - AZOBR_RS22495 0.15 -1.6 57,849 - AZOBR_RS22495 0.15 -0.6 57,849 - AZOBR_RS22495 0.15 -2.3 57,961 - AZOBR_RS22495 0.31 -0.3 57,986 + AZOBR_RS22495 0.35 -1.9 57,987 - AZOBR_RS22495 0.35 +0.3 58,151 - AZOBR_RS22495 0.59 +0.6 58,161 - AZOBR_RS22495 0.60 -0.6 58,502 + -0.7 58,502 + +0.7 58,502 + -1.1 58,502 + +1.0 58,502 + -1.6 58,502 + -0.8 58,503 - +1.3 58,503 - +0.4 58,527 + -0.9 58,528 - +0.4 58,687 - +0.7 58,687 - -0.6
Or see this region's nucleotide sequence