Experiment: L-Threonine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS12020 and AZOBR_RS12025 are separated by 23 nucleotides AZOBR_RS12025 and AZOBR_RS12030 are separated by 126 nucleotides AZOBR_RS12030 and AZOBR_RS12035 are separated by 36 nucleotides
AZOBR_RS12020: AZOBR_RS12020 - acetyl-CoA carboxylase, at 2,526,550 to 2,526,999
_RS12020
AZOBR_RS12025: AZOBR_RS12025 - 3-dehydroquinate dehydratase, at 2,527,023 to 2,527,472
_RS12025
AZOBR_RS12030: AZOBR_RS12030 - amino acid ABC transporter substrate-binding protein, at 2,527,599 to 2,528,378
_RS12030
AZOBR_RS12035: AZOBR_RS12035 - hypothetical protein, at 2,528,415 to 2,529,878
_RS12035
Position (kb)
2527
2528
2529 Strain fitness (log2 ratio)
-1
0
1
2 at 2527.557 kb on - strand at 2527.747 kb on + strand, within AZOBR_RS12030 at 2528.020 kb on + strand, within AZOBR_RS12030 at 2528.020 kb on + strand, within AZOBR_RS12030 at 2528.020 kb on + strand, within AZOBR_RS12030 at 2528.020 kb on + strand, within AZOBR_RS12030 at 2528.020 kb on + strand, within AZOBR_RS12030 at 2528.021 kb on - strand, within AZOBR_RS12030 at 2528.093 kb on - strand, within AZOBR_RS12030 at 2529.091 kb on + strand, within AZOBR_RS12035 at 2529.091 kb on + strand, within AZOBR_RS12035 at 2529.091 kb on + strand, within AZOBR_RS12035 at 2529.100 kb on + strand, within AZOBR_RS12035 at 2529.100 kb on + strand, within AZOBR_RS12035 at 2529.100 kb on + strand, within AZOBR_RS12035 at 2529.101 kb on - strand, within AZOBR_RS12035 at 2529.208 kb on + strand, within AZOBR_RS12035 at 2529.208 kb on + strand, within AZOBR_RS12035 at 2529.208 kb on + strand, within AZOBR_RS12035 at 2529.209 kb on - strand, within AZOBR_RS12035 at 2529.209 kb on - strand, within AZOBR_RS12035 at 2529.209 kb on - strand, within AZOBR_RS12035
Per-strain Table
Position Strand Gene LocusTag Fraction L-Threonine (N) remove 2,527,557 - -0.3 2,527,747 + AZOBR_RS12030 0.19 -0.5 2,528,020 + AZOBR_RS12030 0.54 +0.2 2,528,020 + AZOBR_RS12030 0.54 +0.1 2,528,020 + AZOBR_RS12030 0.54 +0.1 2,528,020 + AZOBR_RS12030 0.54 +0.4 2,528,020 + AZOBR_RS12030 0.54 +1.1 2,528,021 - AZOBR_RS12030 0.54 -0.7 2,528,093 - AZOBR_RS12030 0.63 -0.0 2,529,091 + AZOBR_RS12035 0.46 +0.3 2,529,091 + AZOBR_RS12035 0.46 +2.1 2,529,091 + AZOBR_RS12035 0.46 -0.8 2,529,100 + AZOBR_RS12035 0.47 +1.3 2,529,100 + AZOBR_RS12035 0.47 +0.3 2,529,100 + AZOBR_RS12035 0.47 +0.2 2,529,101 - AZOBR_RS12035 0.47 -0.4 2,529,208 + AZOBR_RS12035 0.54 -0.3 2,529,208 + AZOBR_RS12035 0.54 +0.7 2,529,208 + AZOBR_RS12035 0.54 +0.7 2,529,209 - AZOBR_RS12035 0.54 -0.2 2,529,209 - AZOBR_RS12035 0.54 +2.0 2,529,209 - AZOBR_RS12035 0.54 +0.0
Or see this region's nucleotide sequence