Experiment: A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS21420 and ABZR86_RS21425 are separated by 13 nucleotides ABZR86_RS21425 and ABZR86_RS21430 are separated by 4 nucleotides ABZR86_RS21430 and ABZR86_RS21435 are separated by 5 nucleotides ABZR86_RS21435 and ABZR86_RS21440 are separated by 516 nucleotides
ABZR86_RS21420: ABZR86_RS21420 - alpha/beta fold hydrolase, at 249,760 to 250,602
_RS21420
ABZR86_RS21425: ABZR86_RS21425 - EamA family transporter, at 250,616 to 250,981
_RS21425
ABZR86_RS21430: ABZR86_RS21430 - EamA family transporter, at 250,986 to 251,438
_RS21430
ABZR86_RS21435: ABZR86_RS21435 - DegT/DnrJ/EryC1/StrS family aminotransferase, at 251,444 to 252,646
_RS21435
ABZR86_RS21440: ABZR86_RS21440 - hypothetical protein, at 253,163 to 254,758
_RS21440
Position (kb) 251
252
253 Strain fitness (log2 ratio) -2
-1
0
1 at 250.489 kb on + strand, within ABZR86_RS21420 at 250.490 kb on - strand, within ABZR86_RS21420 at 250.490 kb on - strand, within ABZR86_RS21420 at 250.490 kb on - strand, within ABZR86_RS21420 at 250.490 kb on - strand, within ABZR86_RS21420 at 250.490 kb on - strand, within ABZR86_RS21420 at 251.668 kb on - strand, within ABZR86_RS21435 at 251.858 kb on + strand, within ABZR86_RS21435 at 251.972 kb on + strand, within ABZR86_RS21435 at 251.973 kb on - strand, within ABZR86_RS21435 at 251.973 kb on - strand, within ABZR86_RS21435 at 252.134 kb on + strand, within ABZR86_RS21435 at 252.135 kb on - strand, within ABZR86_RS21435 at 252.397 kb on + strand, within ABZR86_RS21435 at 252.397 kb on + strand, within ABZR86_RS21435 at 252.398 kb on - strand, within ABZR86_RS21435 at 252.398 kb on - strand, within ABZR86_RS21435 at 252.442 kb on - strand, within ABZR86_RS21435 at 252.495 kb on - strand, within ABZR86_RS21435 at 252.500 kb on + strand, within ABZR86_RS21435 at 252.657 kb on + strand at 253.164 kb on + strand at 253.165 kb on - strand at 253.201 kb on + strand at 253.202 kb on - strand at 253.234 kb on - strand at 253.246 kb on - strand at 253.246 kb on - strand at 253.246 kb on - strand at 253.290 kb on + strand at 253.398 kb on + strand, within ABZR86_RS21440 at 253.491 kb on + strand, within ABZR86_RS21440 at 253.509 kb on + strand, within ABZR86_RS21440 at 253.509 kb on + strand, within ABZR86_RS21440 at 253.510 kb on - strand, within ABZR86_RS21440 at 253.510 kb on - strand, within ABZR86_RS21440 at 253.525 kb on - strand, within ABZR86_RS21440 at 253.561 kb on - strand, within ABZR86_RS21440 at 253.561 kb on - strand, within ABZR86_RS21440
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.01 mg/ml remove 250,489 + ABZR86_RS21420 0.86 -0.3 250,490 - ABZR86_RS21420 0.87 -0.4 250,490 - ABZR86_RS21420 0.87 -0.5 250,490 - ABZR86_RS21420 0.87 -0.0 250,490 - ABZR86_RS21420 0.87 -0.3 250,490 - ABZR86_RS21420 0.87 -0.4 251,668 - ABZR86_RS21435 0.19 -2.3 251,858 + ABZR86_RS21435 0.34 -0.7 251,972 + ABZR86_RS21435 0.44 -2.1 251,973 - ABZR86_RS21435 0.44 -1.4 251,973 - ABZR86_RS21435 0.44 +0.1 252,134 + ABZR86_RS21435 0.57 -0.0 252,135 - ABZR86_RS21435 0.57 -1.1 252,397 + ABZR86_RS21435 0.79 -1.9 252,397 + ABZR86_RS21435 0.79 -1.1 252,398 - ABZR86_RS21435 0.79 -2.3 252,398 - ABZR86_RS21435 0.79 -2.3 252,442 - ABZR86_RS21435 0.83 -0.4 252,495 - ABZR86_RS21435 0.87 -0.2 252,500 + ABZR86_RS21435 0.88 -1.2 252,657 + -0.1 253,164 + +0.6 253,165 - -0.8 253,201 + +0.2 253,202 - +0.6 253,234 - -0.3 253,246 - +0.2 253,246 - -0.0 253,246 - +0.1 253,290 + +0.0 253,398 + ABZR86_RS21440 0.15 +0.6 253,491 + ABZR86_RS21440 0.21 +0.0 253,509 + ABZR86_RS21440 0.22 -0.2 253,509 + ABZR86_RS21440 0.22 +0.1 253,510 - ABZR86_RS21440 0.22 -0.7 253,510 - ABZR86_RS21440 0.22 -0.0 253,525 - ABZR86_RS21440 0.23 +0.3 253,561 - ABZR86_RS21440 0.25 +0.1 253,561 - ABZR86_RS21440 0.25 +0.1
Or see this region's nucleotide sequence