Experiment: A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS21170 and ABZR86_RS21175 are separated by 80 nucleotides ABZR86_RS21175 and ABZR86_RS21180 are separated by 158 nucleotides ABZR86_RS21180 and ABZR86_RS21185 are separated by 118 nucleotides ABZR86_RS21185 and ABZR86_RS21190 are separated by 40 nucleotides
ABZR86_RS21170: ABZR86_RS21170 - copper resistance system multicopper oxidase, at 201,250 to 202,959
_RS21170
ABZR86_RS21175: ABZR86_RS21175 - hypothetical protein, at 203,040 to 203,417
_RS21175
ABZR86_RS21180: ABZR86_RS21180 - 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ, at 203,576 to 204,451
_RS21180
ABZR86_RS21185: ABZR86_RS21185 - Slp family lipoprotein, at 204,570 to 205,082
_RS21185
ABZR86_RS21190: ABZR86_RS21190 - cation diffusion facilitator family transporter, at 205,123 to 206,031
_RS21190
Position (kb) 203
204
205 Strain fitness (log2 ratio) -1
0
1 at 202.947 kb on - strand at 202.947 kb on - strand at 203.417 kb on + strand at 203.417 kb on + strand at 203.417 kb on + strand at 203.418 kb on - strand at 203.418 kb on - strand at 203.418 kb on - strand at 203.564 kb on + strand at 203.564 kb on + strand at 203.565 kb on - strand at 203.565 kb on - strand at 203.582 kb on + strand at 203.582 kb on + strand at 203.594 kb on + strand at 203.595 kb on - strand at 203.714 kb on + strand, within ABZR86_RS21180 at 203.715 kb on - strand, within ABZR86_RS21180 at 203.753 kb on + strand, within ABZR86_RS21180 at 204.032 kb on + strand, within ABZR86_RS21180 at 204.033 kb on - strand, within ABZR86_RS21180 at 204.098 kb on + strand, within ABZR86_RS21180 at 204.176 kb on + strand, within ABZR86_RS21180 at 204.176 kb on + strand, within ABZR86_RS21180 at 204.176 kb on + strand, within ABZR86_RS21180 at 204.176 kb on + strand, within ABZR86_RS21180 at 204.176 kb on + strand, within ABZR86_RS21180 at 204.176 kb on + strand, within ABZR86_RS21180 at 204.176 kb on + strand, within ABZR86_RS21180 at 204.176 kb on + strand, within ABZR86_RS21180 at 204.176 kb on + strand, within ABZR86_RS21180 at 204.176 kb on + strand, within ABZR86_RS21180 at 204.177 kb on - strand, within ABZR86_RS21180 at 204.177 kb on - strand, within ABZR86_RS21180 at 204.177 kb on - strand, within ABZR86_RS21180 at 204.177 kb on - strand, within ABZR86_RS21180 at 204.177 kb on - strand, within ABZR86_RS21180 at 204.177 kb on - strand, within ABZR86_RS21180 at 204.481 kb on + strand at 204.481 kb on + strand at 204.657 kb on + strand, within ABZR86_RS21185 at 204.657 kb on + strand, within ABZR86_RS21185 at 204.657 kb on + strand, within ABZR86_RS21185 at 204.658 kb on - strand, within ABZR86_RS21185 at 204.658 kb on - strand, within ABZR86_RS21185 at 204.665 kb on + strand, within ABZR86_RS21185 at 204.666 kb on - strand, within ABZR86_RS21185 at 204.717 kb on + strand, within ABZR86_RS21185 at 204.717 kb on + strand, within ABZR86_RS21185 at 204.718 kb on - strand, within ABZR86_RS21185 at 204.718 kb on - strand, within ABZR86_RS21185 at 204.876 kb on + strand, within ABZR86_RS21185 at 204.877 kb on - strand, within ABZR86_RS21185 at 204.894 kb on + strand, within ABZR86_RS21185 at 204.895 kb on - strand, within ABZR86_RS21185 at 204.970 kb on - strand, within ABZR86_RS21185 at 204.973 kb on + strand, within ABZR86_RS21185 at 204.973 kb on + strand, within ABZR86_RS21185 at 204.973 kb on + strand, within ABZR86_RS21185 at 204.973 kb on + strand, within ABZR86_RS21185 at 204.974 kb on - strand, within ABZR86_RS21185 at 204.974 kb on - strand, within ABZR86_RS21185 at 204.974 kb on - strand, within ABZR86_RS21185 at 205.013 kb on + strand, within ABZR86_RS21185 at 205.014 kb on - strand, within ABZR86_RS21185 at 205.091 kb on + strand at 205.091 kb on + strand at 205.098 kb on + strand at 205.098 kb on + strand at 205.099 kb on - strand at 205.355 kb on - strand, within ABZR86_RS21190 at 205.414 kb on + strand, within ABZR86_RS21190 at 205.414 kb on + strand, within ABZR86_RS21190 at 205.414 kb on + strand, within ABZR86_RS21190 at 205.414 kb on + strand, within ABZR86_RS21190 at 205.414 kb on + strand, within ABZR86_RS21190 at 205.414 kb on + strand, within ABZR86_RS21190 at 205.414 kb on + strand, within ABZR86_RS21190 at 205.414 kb on + strand, within ABZR86_RS21190 at 205.415 kb on - strand, within ABZR86_RS21190 at 205.415 kb on - strand, within ABZR86_RS21190 at 205.415 kb on - strand, within ABZR86_RS21190
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.01 mg/ml remove 202,947 - +0.4 202,947 - -0.1 203,417 + +0.4 203,417 + -0.3 203,417 + +0.0 203,418 - +0.4 203,418 - -0.0 203,418 - +0.9 203,564 + -0.6 203,564 + +0.5 203,565 - +0.4 203,565 - +0.7 203,582 + -0.6 203,582 + -0.1 203,594 + +1.2 203,595 - -0.2 203,714 + ABZR86_RS21180 0.16 -0.3 203,715 - ABZR86_RS21180 0.16 -0.1 203,753 + ABZR86_RS21180 0.20 -0.5 204,032 + ABZR86_RS21180 0.52 -0.9 204,033 - ABZR86_RS21180 0.52 +0.0 204,098 + ABZR86_RS21180 0.60 -0.4 204,176 + ABZR86_RS21180 0.68 -0.0 204,176 + ABZR86_RS21180 0.68 -0.9 204,176 + ABZR86_RS21180 0.68 -0.4 204,176 + ABZR86_RS21180 0.68 +0.0 204,176 + ABZR86_RS21180 0.68 -0.1 204,176 + ABZR86_RS21180 0.68 -0.4 204,176 + ABZR86_RS21180 0.68 +0.5 204,176 + ABZR86_RS21180 0.68 -0.1 204,176 + ABZR86_RS21180 0.68 -0.3 204,176 + ABZR86_RS21180 0.68 +0.1 204,177 - ABZR86_RS21180 0.69 -0.7 204,177 - ABZR86_RS21180 0.69 +0.1 204,177 - ABZR86_RS21180 0.69 +0.1 204,177 - ABZR86_RS21180 0.69 -0.3 204,177 - ABZR86_RS21180 0.69 -0.4 204,177 - ABZR86_RS21180 0.69 -0.8 204,481 + +0.1 204,481 + +0.4 204,657 + ABZR86_RS21185 0.17 +0.4 204,657 + ABZR86_RS21185 0.17 +0.0 204,657 + ABZR86_RS21185 0.17 +0.1 204,658 - ABZR86_RS21185 0.17 +0.2 204,658 - ABZR86_RS21185 0.17 -0.1 204,665 + ABZR86_RS21185 0.19 -0.1 204,666 - ABZR86_RS21185 0.19 +0.2 204,717 + ABZR86_RS21185 0.29 +0.3 204,717 + ABZR86_RS21185 0.29 +0.3 204,718 - ABZR86_RS21185 0.29 +0.9 204,718 - ABZR86_RS21185 0.29 +0.6 204,876 + ABZR86_RS21185 0.60 +0.2 204,877 - ABZR86_RS21185 0.60 -0.3 204,894 + ABZR86_RS21185 0.63 -0.1 204,895 - ABZR86_RS21185 0.63 +0.3 204,970 - ABZR86_RS21185 0.78 -0.3 204,973 + ABZR86_RS21185 0.79 +0.3 204,973 + ABZR86_RS21185 0.79 -0.9 204,973 + ABZR86_RS21185 0.79 +0.0 204,973 + ABZR86_RS21185 0.79 +0.0 204,974 - ABZR86_RS21185 0.79 +0.7 204,974 - ABZR86_RS21185 0.79 +0.4 204,974 - ABZR86_RS21185 0.79 +1.1 205,013 + ABZR86_RS21185 0.86 +0.1 205,014 - ABZR86_RS21185 0.87 -0.3 205,091 + +0.2 205,091 + +0.5 205,098 + +0.1 205,098 + -0.3 205,099 - +0.4 205,355 - ABZR86_RS21190 0.26 +0.2 205,414 + ABZR86_RS21190 0.32 -0.2 205,414 + ABZR86_RS21190 0.32 +0.0 205,414 + ABZR86_RS21190 0.32 +0.7 205,414 + ABZR86_RS21190 0.32 +1.1 205,414 + ABZR86_RS21190 0.32 -0.1 205,414 + ABZR86_RS21190 0.32 +1.1 205,414 + ABZR86_RS21190 0.32 -0.3 205,414 + ABZR86_RS21190 0.32 -0.6 205,415 - ABZR86_RS21190 0.32 +0.5 205,415 - ABZR86_RS21190 0.32 -0.0 205,415 - ABZR86_RS21190 0.32 -0.0
Or see this region's nucleotide sequence