Experiment: A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS19785 and ABZR86_RS19790 are separated by 102 nucleotides ABZR86_RS19790 and ABZR86_RS19795 overlap by 8 nucleotides ABZR86_RS19795 and ABZR86_RS19800 are separated by 37 nucleotides ABZR86_RS19800 and ABZR86_RS19805 are separated by 5 nucleotides
ABZR86_RS19785: ABZR86_RS19785 - phosphoenolpyruvate--protein phosphotransferase, at 454,885 to 456,615
_RS19785
ABZR86_RS19790: ABZR86_RS19790 - HPr family phosphocarrier protein, at 456,718 to 456,987
_RS19790
ABZR86_RS19795: ABZR86_RS19795 - PTS sugar transporter subunit IIA, at 456,980 to 457,372
_RS19795
ABZR86_RS19800: ABZR86_RS19800 - RNase adapter RapZ, at 457,410 to 458,312
_RS19800
ABZR86_RS19805: ABZR86_RS19805 - HPr(Ser) kinase/phosphatase, at 458,318 to 459,268
_RS19805
Position (kb) 456
457
458 Strain fitness (log2 ratio) -2
-1
0
1 at 456.041 kb on + strand, within ABZR86_RS19785 at 456.242 kb on + strand, within ABZR86_RS19785 at 456.242 kb on + strand, within ABZR86_RS19785 at 456.243 kb on - strand, within ABZR86_RS19785 at 456.243 kb on - strand, within ABZR86_RS19785 at 456.315 kb on - strand, within ABZR86_RS19785 at 456.315 kb on - strand, within ABZR86_RS19785 at 456.695 kb on + strand at 456.695 kb on + strand at 456.695 kb on + strand at 456.695 kb on + strand at 456.695 kb on + strand at 456.695 kb on + strand at 456.695 kb on + strand at 456.696 kb on - strand at 456.696 kb on - strand at 456.696 kb on - strand at 456.696 kb on - strand at 456.696 kb on - strand at 456.696 kb on - strand at 456.720 kb on - strand at 456.889 kb on + strand, within ABZR86_RS19790 at 456.889 kb on + strand, within ABZR86_RS19790 at 456.889 kb on + strand, within ABZR86_RS19790 at 456.890 kb on - strand, within ABZR86_RS19790 at 456.890 kb on - strand, within ABZR86_RS19790 at 456.890 kb on - strand, within ABZR86_RS19790 at 456.890 kb on - strand, within ABZR86_RS19790 at 456.890 kb on - strand, within ABZR86_RS19790 at 456.890 kb on - strand, within ABZR86_RS19790 at 456.964 kb on + strand at 456.964 kb on + strand at 457.059 kb on + strand, within ABZR86_RS19795 at 457.059 kb on + strand, within ABZR86_RS19795 at 457.059 kb on + strand, within ABZR86_RS19795 at 457.059 kb on + strand, within ABZR86_RS19795 at 457.059 kb on + strand, within ABZR86_RS19795 at 457.059 kb on + strand, within ABZR86_RS19795 at 457.059 kb on + strand, within ABZR86_RS19795 at 457.059 kb on + strand, within ABZR86_RS19795 at 457.059 kb on + strand, within ABZR86_RS19795 at 457.059 kb on + strand, within ABZR86_RS19795 at 457.060 kb on - strand, within ABZR86_RS19795 at 457.060 kb on - strand, within ABZR86_RS19795 at 457.068 kb on - strand, within ABZR86_RS19795 at 457.301 kb on + strand, within ABZR86_RS19795 at 457.301 kb on + strand, within ABZR86_RS19795 at 457.301 kb on + strand, within ABZR86_RS19795 at 457.301 kb on + strand, within ABZR86_RS19795 at 457.301 kb on + strand, within ABZR86_RS19795 at 457.302 kb on - strand, within ABZR86_RS19795 at 457.400 kb on + strand at 457.400 kb on + strand at 457.400 kb on + strand at 457.401 kb on - strand at 457.401 kb on - strand at 457.401 kb on - strand at 457.401 kb on - strand at 457.401 kb on - strand at 457.401 kb on - strand at 457.486 kb on + strand at 457.486 kb on + strand at 457.486 kb on + strand at 457.487 kb on - strand at 457.487 kb on - strand at 457.487 kb on - strand at 457.534 kb on + strand, within ABZR86_RS19800 at 457.534 kb on + strand, within ABZR86_RS19800 at 457.534 kb on + strand, within ABZR86_RS19800 at 457.534 kb on + strand, within ABZR86_RS19800 at 457.534 kb on + strand, within ABZR86_RS19800 at 457.535 kb on - strand, within ABZR86_RS19800 at 457.535 kb on - strand, within ABZR86_RS19800 at 457.535 kb on - strand, within ABZR86_RS19800 at 457.535 kb on - strand, within ABZR86_RS19800 at 457.535 kb on - strand, within ABZR86_RS19800 at 457.535 kb on - strand, within ABZR86_RS19800 at 457.535 kb on - strand, within ABZR86_RS19800 at 457.535 kb on - strand, within ABZR86_RS19800 at 457.535 kb on - strand, within ABZR86_RS19800 at 457.535 kb on - strand, within ABZR86_RS19800 at 457.535 kb on - strand, within ABZR86_RS19800 at 457.589 kb on + strand, within ABZR86_RS19800 at 457.590 kb on - strand, within ABZR86_RS19800 at 457.600 kb on + strand, within ABZR86_RS19800 at 457.600 kb on + strand, within ABZR86_RS19800 at 457.600 kb on + strand, within ABZR86_RS19800 at 457.601 kb on - strand, within ABZR86_RS19800 at 457.795 kb on + strand, within ABZR86_RS19800 at 457.796 kb on - strand, within ABZR86_RS19800 at 457.796 kb on - strand, within ABZR86_RS19800 at 458.188 kb on + strand, within ABZR86_RS19800 at 458.188 kb on + strand, within ABZR86_RS19800 at 458.188 kb on + strand, within ABZR86_RS19800 at 458.188 kb on + strand, within ABZR86_RS19800
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.01 mg/ml remove 456,041 + ABZR86_RS19785 0.67 +0.4 456,242 + ABZR86_RS19785 0.78 +0.3 456,242 + ABZR86_RS19785 0.78 +0.5 456,243 - ABZR86_RS19785 0.78 -0.3 456,243 - ABZR86_RS19785 0.78 -1.3 456,315 - ABZR86_RS19785 0.83 +0.6 456,315 - ABZR86_RS19785 0.83 +0.2 456,695 + -0.4 456,695 + +0.2 456,695 + -0.5 456,695 + +0.1 456,695 + -0.5 456,695 + +0.2 456,695 + -0.0 456,696 - +0.1 456,696 - +0.1 456,696 - +0.1 456,696 - +0.3 456,696 - +0.2 456,696 - -0.2 456,720 - +0.6 456,889 + ABZR86_RS19790 0.63 +0.2 456,889 + ABZR86_RS19790 0.63 +0.1 456,889 + ABZR86_RS19790 0.63 +0.5 456,890 - ABZR86_RS19790 0.64 +0.8 456,890 - ABZR86_RS19790 0.64 +0.6 456,890 - ABZR86_RS19790 0.64 +0.1 456,890 - ABZR86_RS19790 0.64 +0.1 456,890 - ABZR86_RS19790 0.64 +0.1 456,890 - ABZR86_RS19790 0.64 +1.0 456,964 + +0.9 456,964 + +0.2 457,059 + ABZR86_RS19795 0.20 -2.0 457,059 + ABZR86_RS19795 0.20 -0.8 457,059 + ABZR86_RS19795 0.20 -0.0 457,059 + ABZR86_RS19795 0.20 -0.7 457,059 + ABZR86_RS19795 0.20 -0.9 457,059 + ABZR86_RS19795 0.20 -2.5 457,059 + ABZR86_RS19795 0.20 -1.2 457,059 + ABZR86_RS19795 0.20 -1.3 457,059 + ABZR86_RS19795 0.20 +0.3 457,059 + ABZR86_RS19795 0.20 -2.1 457,060 - ABZR86_RS19795 0.20 +0.6 457,060 - ABZR86_RS19795 0.20 +0.9 457,068 - ABZR86_RS19795 0.22 -1.1 457,301 + ABZR86_RS19795 0.82 +0.3 457,301 + ABZR86_RS19795 0.82 -1.0 457,301 + ABZR86_RS19795 0.82 -0.3 457,301 + ABZR86_RS19795 0.82 -1.2 457,301 + ABZR86_RS19795 0.82 -1.1 457,302 - ABZR86_RS19795 0.82 -1.2 457,400 + +0.2 457,400 + -0.8 457,400 + +0.0 457,401 - -0.9 457,401 - -0.3 457,401 - -0.4 457,401 - +0.4 457,401 - +0.1 457,401 - +0.2 457,486 + +1.7 457,486 + -0.8 457,486 + -1.3 457,487 - -2.2 457,487 - +1.2 457,487 - +0.3 457,534 + ABZR86_RS19800 0.14 -0.6 457,534 + ABZR86_RS19800 0.14 -1.1 457,534 + ABZR86_RS19800 0.14 +0.1 457,534 + ABZR86_RS19800 0.14 -0.9 457,534 + ABZR86_RS19800 0.14 +0.1 457,535 - ABZR86_RS19800 0.14 +0.7 457,535 - ABZR86_RS19800 0.14 -0.3 457,535 - ABZR86_RS19800 0.14 -0.6 457,535 - ABZR86_RS19800 0.14 +0.1 457,535 - ABZR86_RS19800 0.14 -0.7 457,535 - ABZR86_RS19800 0.14 +0.6 457,535 - ABZR86_RS19800 0.14 -0.8 457,535 - ABZR86_RS19800 0.14 -0.4 457,535 - ABZR86_RS19800 0.14 +0.1 457,535 - ABZR86_RS19800 0.14 +0.0 457,535 - ABZR86_RS19800 0.14 -0.1 457,589 + ABZR86_RS19800 0.20 -0.4 457,590 - ABZR86_RS19800 0.20 -0.8 457,600 + ABZR86_RS19800 0.21 -0.6 457,600 + ABZR86_RS19800 0.21 -0.6 457,600 + ABZR86_RS19800 0.21 +0.1 457,601 - ABZR86_RS19800 0.21 -0.3 457,795 + ABZR86_RS19800 0.43 +0.2 457,796 - ABZR86_RS19800 0.43 -0.0 457,796 - ABZR86_RS19800 0.43 -0.7 458,188 + ABZR86_RS19800 0.86 -0.7 458,188 + ABZR86_RS19800 0.86 -0.5 458,188 + ABZR86_RS19800 0.86 +0.3 458,188 + ABZR86_RS19800 0.86 -0.2
Or see this region's nucleotide sequence