Experiment: A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS18370 and ABZR86_RS18375 are separated by 9 nucleotides ABZR86_RS18375 and ABZR86_RS18380 are separated by 306 nucleotides ABZR86_RS18380 and ABZR86_RS18385 overlap by 4 nucleotides ABZR86_RS18385 and ABZR86_RS18390 are separated by 37 nucleotides
ABZR86_RS18370: ABZR86_RS18370 - M90 family metallopeptidase, at 95,173 to 95,940
_RS18370
ABZR86_RS18375: ABZR86_RS18375 - hypothetical protein, at 95,950 to 96,201
_RS18375
ABZR86_RS18380: ABZR86_RS18380 - biotin--[acetyl-CoA-carboxylase] ligase, at 96,508 to 97,479
_RS18380
ABZR86_RS18385: ABZR86_RS18385 - type III pantothenate kinase, at 97,476 to 98,234
_RS18385
ABZR86_RS18390: ABZR86_RS18390 - SPOR domain-containing protein, at 98,272 to 99,033
_RS18390
Position (kb) 96
97
98 Strain fitness (log2 ratio) -2
-1
0
1 at 95.649 kb on - strand, within ABZR86_RS18370 at 96.283 kb on - strand at 96.325 kb on - strand at 96.325 kb on - strand at 96.325 kb on - strand at 96.375 kb on + strand at 96.375 kb on + strand at 96.376 kb on - strand at 96.376 kb on - strand at 96.376 kb on - strand at 96.376 kb on - strand at 96.376 kb on - strand at 96.376 kb on - strand at 96.376 kb on - strand at 96.376 kb on - strand at 96.376 kb on - strand at 96.378 kb on + strand at 96.378 kb on + strand at 96.378 kb on + strand at 96.379 kb on - strand at 96.379 kb on - strand at 96.379 kb on - strand at 96.402 kb on + strand at 96.403 kb on - strand at 96.403 kb on - strand at 96.403 kb on - strand at 96.425 kb on + strand at 96.425 kb on + strand at 96.426 kb on - strand at 96.426 kb on - strand at 96.426 kb on - strand at 96.453 kb on + strand at 96.454 kb on - strand at 98.232 kb on + strand at 98.232 kb on + strand at 98.232 kb on + strand at 98.233 kb on - strand at 98.233 kb on - strand at 98.233 kb on - strand at 98.251 kb on + strand at 98.261 kb on + strand at 98.261 kb on + strand at 98.261 kb on + strand at 98.262 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.01 mg/ml remove 95,649 - ABZR86_RS18370 0.62 -0.1 96,283 - +0.3 96,325 - +0.2 96,325 - +0.6 96,325 - +0.9 96,375 + -0.6 96,375 + +0.9 96,376 - +0.8 96,376 - +0.5 96,376 - +0.2 96,376 - +0.1 96,376 - +0.0 96,376 - -0.0 96,376 - +0.7 96,376 - -0.1 96,376 - +0.3 96,378 + -0.1 96,378 + +0.2 96,378 + +0.4 96,379 - +0.8 96,379 - +0.5 96,379 - +0.1 96,402 + +0.1 96,403 - +0.5 96,403 - -0.3 96,403 - -2.1 96,425 + +0.6 96,425 + +0.5 96,426 - -0.1 96,426 - +0.4 96,426 - +0.4 96,453 + +1.6 96,454 - -0.3 98,232 + +0.5 98,232 + +0.2 98,232 + +0.4 98,233 - +0.5 98,233 - -0.4 98,233 - +0.4 98,251 + +0.5 98,261 + +0.2 98,261 + -0.1 98,261 + +0.5 98,262 - +0.3
Or see this region's nucleotide sequence