Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS18120

Experiment: A22 0.01 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS18115 and ABZR86_RS18120 are separated by 22 nucleotidesABZR86_RS18120 and ABZR86_RS18125 are separated by 47 nucleotides ABZR86_RS18115: ABZR86_RS18115 - MFS transporter, at 37,256 to 38,449 _RS18115 ABZR86_RS18120: ABZR86_RS18120 - SDR family oxidoreductase, at 38,472 to 39,530 _RS18120 ABZR86_RS18125: ABZR86_RS18125 - zinc-binding alcohol dehydrogenase family protein, at 39,578 to 40,591 _RS18125 Position (kb) 38 39 40Strain fitness (log2 ratio) -2 -1 0 1 2at 37.544 kb on + strand, within ABZR86_RS18115at 37.545 kb on - strand, within ABZR86_RS18115at 37.934 kb on + strand, within ABZR86_RS18115at 37.934 kb on + strand, within ABZR86_RS18115at 37.934 kb on + strand, within ABZR86_RS18115at 37.934 kb on + strand, within ABZR86_RS18115at 37.934 kb on + strand, within ABZR86_RS18115at 37.935 kb on - strand, within ABZR86_RS18115at 37.935 kb on - strand, within ABZR86_RS18115at 37.935 kb on - strand, within ABZR86_RS18115at 37.935 kb on - strand, within ABZR86_RS18115at 37.935 kb on - strand, within ABZR86_RS18115at 37.935 kb on - strand, within ABZR86_RS18115at 37.935 kb on - strand, within ABZR86_RS18115at 37.935 kb on - strand, within ABZR86_RS18115at 37.935 kb on - strand, within ABZR86_RS18115at 37.935 kb on - strand, within ABZR86_RS18115at 37.935 kb on - strand, within ABZR86_RS18115at 38.157 kb on + strand, within ABZR86_RS18115at 38.158 kb on - strand, within ABZR86_RS18115at 38.163 kb on + strand, within ABZR86_RS18115at 38.694 kb on + strand, within ABZR86_RS18120at 38.695 kb on - strand, within ABZR86_RS18120at 38.823 kb on + strand, within ABZR86_RS18120at 38.824 kb on - strand, within ABZR86_RS18120at 38.824 kb on - strand, within ABZR86_RS18120at 38.824 kb on - strand, within ABZR86_RS18120at 38.833 kb on - strand, within ABZR86_RS18120at 38.833 kb on - strand, within ABZR86_RS18120at 38.833 kb on - strand, within ABZR86_RS18120at 39.036 kb on + strand, within ABZR86_RS18120at 39.036 kb on + strand, within ABZR86_RS18120at 39.036 kb on + strand, within ABZR86_RS18120at 39.036 kb on + strand, within ABZR86_RS18120at 39.036 kb on + strand, within ABZR86_RS18120at 39.036 kb on + strand, within ABZR86_RS18120at 39.037 kb on - strand, within ABZR86_RS18120at 39.037 kb on - strand, within ABZR86_RS18120at 39.037 kb on - strand, within ABZR86_RS18120at 39.037 kb on - strand, within ABZR86_RS18120at 39.246 kb on + strand, within ABZR86_RS18120at 39.247 kb on - strand, within ABZR86_RS18120at 39.360 kb on + strand, within ABZR86_RS18120at 39.370 kb on + strand, within ABZR86_RS18120at 39.370 kb on + strand, within ABZR86_RS18120at 39.371 kb on - strand, within ABZR86_RS18120at 39.371 kb on - strand, within ABZR86_RS18120at 39.411 kb on + strand, within ABZR86_RS18120at 39.411 kb on + strand, within ABZR86_RS18120at 39.411 kb on + strand, within ABZR86_RS18120at 39.412 kb on - strand, within ABZR86_RS18120at 39.412 kb on - strand, within ABZR86_RS18120at 39.412 kb on - strand, within ABZR86_RS18120at 39.412 kb on - strand, within ABZR86_RS18120at 39.463 kb on - strandat 39.463 kb on - strandat 39.463 kb on - strandat 39.715 kb on + strand, within ABZR86_RS18125at 39.787 kb on - strand, within ABZR86_RS18125at 39.836 kb on + strand, within ABZR86_RS18125at 39.836 kb on + strand, within ABZR86_RS18125at 39.837 kb on - strand, within ABZR86_RS18125at 39.839 kb on + strand, within ABZR86_RS18125at 39.839 kb on + strand, within ABZR86_RS18125at 39.840 kb on - strand, within ABZR86_RS18125at 40.232 kb on + strand, within ABZR86_RS18125at 40.232 kb on + strand, within ABZR86_RS18125at 40.232 kb on + strand, within ABZR86_RS18125at 40.232 kb on + strand, within ABZR86_RS18125at 40.232 kb on + strand, within ABZR86_RS18125at 40.232 kb on + strand, within ABZR86_RS18125at 40.233 kb on - strand, within ABZR86_RS18125at 40.233 kb on - strand, within ABZR86_RS18125at 40.233 kb on - strand, within ABZR86_RS18125at 40.233 kb on - strand, within ABZR86_RS18125at 40.233 kb on - strand, within ABZR86_RS18125at 40.233 kb on - strand, within ABZR86_RS18125at 40.233 kb on - strand, within ABZR86_RS18125at 40.246 kb on + strand, within ABZR86_RS18125at 40.247 kb on - strand, within ABZR86_RS18125at 40.247 kb on - strand, within ABZR86_RS18125at 40.247 kb on - strand, within ABZR86_RS18125

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Per-strain Table

Position Strand Gene LocusTag Fraction A22 0.01 mg/ml
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37,544 + ABZR86_RS18115 0.24 +0.2
37,545 - ABZR86_RS18115 0.24 -0.4
37,934 + ABZR86_RS18115 0.57 +0.6
37,934 + ABZR86_RS18115 0.57 -0.1
37,934 + ABZR86_RS18115 0.57 +0.4
37,934 + ABZR86_RS18115 0.57 -0.5
37,934 + ABZR86_RS18115 0.57 +0.2
37,935 - ABZR86_RS18115 0.57 -0.4
37,935 - ABZR86_RS18115 0.57 +0.5
37,935 - ABZR86_RS18115 0.57 -1.0
37,935 - ABZR86_RS18115 0.57 -1.8
37,935 - ABZR86_RS18115 0.57 +0.6
37,935 - ABZR86_RS18115 0.57 +1.0
37,935 - ABZR86_RS18115 0.57 +1.3
37,935 - ABZR86_RS18115 0.57 -0.1
37,935 - ABZR86_RS18115 0.57 -0.7
37,935 - ABZR86_RS18115 0.57 -0.4
37,935 - ABZR86_RS18115 0.57 +0.7
38,157 + ABZR86_RS18115 0.75 -1.0
38,158 - ABZR86_RS18115 0.76 -0.1
38,163 + ABZR86_RS18115 0.76 -0.6
38,694 + ABZR86_RS18120 0.21 +0.1
38,695 - ABZR86_RS18120 0.21 +1.2
38,823 + ABZR86_RS18120 0.33 +0.2
38,824 - ABZR86_RS18120 0.33 +0.7
38,824 - ABZR86_RS18120 0.33 +0.1
38,824 - ABZR86_RS18120 0.33 +0.1
38,833 - ABZR86_RS18120 0.34 -0.1
38,833 - ABZR86_RS18120 0.34 -0.1
38,833 - ABZR86_RS18120 0.34 +0.1
39,036 + ABZR86_RS18120 0.53 -0.0
39,036 + ABZR86_RS18120 0.53 -0.2
39,036 + ABZR86_RS18120 0.53 +1.8
39,036 + ABZR86_RS18120 0.53 +0.3
39,036 + ABZR86_RS18120 0.53 +0.1
39,036 + ABZR86_RS18120 0.53 +0.3
39,037 - ABZR86_RS18120 0.53 +0.1
39,037 - ABZR86_RS18120 0.53 -0.2
39,037 - ABZR86_RS18120 0.53 -0.1
39,037 - ABZR86_RS18120 0.53 -0.2
39,246 + ABZR86_RS18120 0.73 +0.5
39,247 - ABZR86_RS18120 0.73 -0.1
39,360 + ABZR86_RS18120 0.84 +0.4
39,370 + ABZR86_RS18120 0.85 +0.7
39,370 + ABZR86_RS18120 0.85 -0.3
39,371 - ABZR86_RS18120 0.85 -0.1
39,371 - ABZR86_RS18120 0.85 +0.1
39,411 + ABZR86_RS18120 0.89 +0.1
39,411 + ABZR86_RS18120 0.89 -0.9
39,411 + ABZR86_RS18120 0.89 +0.6
39,412 - ABZR86_RS18120 0.89 +2.5
39,412 - ABZR86_RS18120 0.89 -1.1
39,412 - ABZR86_RS18120 0.89 +0.6
39,412 - ABZR86_RS18120 0.89 -0.3
39,463 - +0.5
39,463 - +0.4
39,463 - -0.1
39,715 + ABZR86_RS18125 0.14 -0.2
39,787 - ABZR86_RS18125 0.21 -0.7
39,836 + ABZR86_RS18125 0.25 -0.0
39,836 + ABZR86_RS18125 0.25 -0.2
39,837 - ABZR86_RS18125 0.26 +0.1
39,839 + ABZR86_RS18125 0.26 -0.3
39,839 + ABZR86_RS18125 0.26 -0.0
39,840 - ABZR86_RS18125 0.26 +0.6
40,232 + ABZR86_RS18125 0.64 +0.4
40,232 + ABZR86_RS18125 0.64 -0.8
40,232 + ABZR86_RS18125 0.64 +0.1
40,232 + ABZR86_RS18125 0.64 -0.4
40,232 + ABZR86_RS18125 0.64 +0.4
40,232 + ABZR86_RS18125 0.64 -1.3
40,233 - ABZR86_RS18125 0.65 +0.5
40,233 - ABZR86_RS18125 0.65 -0.5
40,233 - ABZR86_RS18125 0.65 +0.3
40,233 - ABZR86_RS18125 0.65 +0.9
40,233 - ABZR86_RS18125 0.65 +0.9
40,233 - ABZR86_RS18125 0.65 -1.1
40,233 - ABZR86_RS18125 0.65 -1.9
40,246 + ABZR86_RS18125 0.66 +0.1
40,247 - ABZR86_RS18125 0.66 -0.4
40,247 - ABZR86_RS18125 0.66 +0.0
40,247 - ABZR86_RS18125 0.66 +0.0

Or see this region's nucleotide sequence