Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS12210

Experiment: A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.01 mg/ml
2,728,464	+		ABZR86_RS12200	0.81	-0.8
2,728,464	+		ABZR86_RS12200	0.81	-0.7
2,728,464	+		ABZR86_RS12200	0.81	+0.0
2,728,464	+		ABZR86_RS12200	0.81	+0.4
2,728,464	+		ABZR86_RS12200	0.81	-2.5
2,728,465	-		ABZR86_RS12200	0.81	-0.2
2,728,465	-		ABZR86_RS12200	0.81	-1.4
2,728,465	-		ABZR86_RS12200	0.81	-0.5
2,728,465	-		ABZR86_RS12200	0.81	-0.0
2,728,465	-		ABZR86_RS12200	0.81	+1.0
2,728,465	-		ABZR86_RS12200	0.81	-0.4
2,728,465	-		ABZR86_RS12200	0.81	-0.5
2,728,465	-		ABZR86_RS12200	0.81	-0.5
2,728,630	+				+0.4
2,728,630	+				-1.1
2,728,630	+				-0.1
2,728,631	-				-0.1
2,728,631	-				+0.7
2,728,682	+				-0.3
2,728,683	-				-0.5
2,728,683	-				-0.5
2,728,785	-		ABZR86_RS12205	0.17	-0.7
2,728,838	+		ABZR86_RS12205	0.24	-0.7
2,728,838	+		ABZR86_RS12205	0.24	-0.3
2,728,839	-		ABZR86_RS12205	0.24	+0.0
2,728,839	-		ABZR86_RS12205	0.24	-0.5
2,728,839	-		ABZR86_RS12205	0.24	-0.7
2,728,857	+		ABZR86_RS12205	0.26	+0.9
2,728,877	+		ABZR86_RS12205	0.28	-0.2
2,728,877	+		ABZR86_RS12205	0.28	-0.1
2,728,895	+		ABZR86_RS12205	0.31	+0.5
2,728,910	+		ABZR86_RS12205	0.33	+0.9
2,728,910	+		ABZR86_RS12205	0.33	-0.4
2,728,910	+		ABZR86_RS12205	0.33	-0.0
2,728,911	-		ABZR86_RS12205	0.33	+0.8
2,728,911	-		ABZR86_RS12205	0.33	+0.2
2,728,934	+		ABZR86_RS12205	0.36	-1.0
2,728,935	-		ABZR86_RS12205	0.36	+1.5
2,729,303	+		ABZR86_RS12205	0.81	-1.1
2,729,304	-		ABZR86_RS12205	0.82	-0.0
2,729,304	-		ABZR86_RS12205	0.82	-0.1
2,729,482	+		ABZR86_RS12210	0.11	-1.4
2,729,483	-		ABZR86_RS12210	0.11	-0.3
2,729,593	+		ABZR86_RS12210	0.46	-0.4
2,729,593	+		ABZR86_RS12210	0.46	-0.6
2,729,594	-		ABZR86_RS12210	0.47	-0.4
2,729,594	-		ABZR86_RS12210	0.47	-0.0
2,729,594	-		ABZR86_RS12210	0.47	-0.7
2,729,737	-				-0.3
2,729,805	+				+0.3
2,729,805	+				-0.6
2,729,806	-				-1.0
2,729,808	+				+0.5
2,729,808	+				+0.0
2,729,808	+				-0.3
2,729,808	+				+0.2
2,729,808	+				+0.6
2,729,808	+				-0.3
2,729,808	+				+0.0
2,729,808	+				-0.3
2,729,809	-				+1.0
2,729,809	-				+0.3
2,729,809	-				-0.7
2,729,809	-				+0.5
2,729,809	-				+0.1
2,729,809	-				-0.3
2,729,809	-				+0.0
2,729,809	-				-0.2
2,729,809	-				+0.2
2,729,848	-				+0.9
2,730,173	+		ABZR86_RS12215	0.31	-1.0
2,730,267	-		ABZR86_RS12215	0.42	-0.8
2,730,464	+		ABZR86_RS12215	0.64	-2.3
2,730,465	-		ABZR86_RS12215	0.64	-0.9
2,730,554	+		ABZR86_RS12215	0.74	-1.5
2,730,555	-		ABZR86_RS12215	0.74	-1.4
2,730,594	-		ABZR86_RS12215	0.78	-1.4
2,730,594	-		ABZR86_RS12215	0.78	+0.6
2,730,638	+		ABZR86_RS12215	0.83	+0.1
2,730,639	-		ABZR86_RS12215	0.83	-0.4
2,730,743	+				-0.2
2,730,744	-				-1.0