Experiment: A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS07655 and ABZR86_RS07660 are separated by 339 nucleotides ABZR86_RS07660 and ABZR86_RS07665 overlap by 4 nucleotides
ABZR86_RS07655: ABZR86_RS07655 - TonB-dependent receptor, at 1,696,456 to 1,698,909
_RS07655
ABZR86_RS07660: ABZR86_RS07660 - exodeoxyribonuclease V subunit gamma, at 1,699,249 to 1,702,737
_RS07660
ABZR86_RS07665: ABZR86_RS07665 - exodeoxyribonuclease V subunit beta, at 1,702,734 to 1,706,405
_RS07665
Position (kb)
1699
1700
1701
1702
1703 Strain fitness (log2 ratio)
-2
-1
0
1 at 1698.307 kb on + strand, within ABZR86_RS07655 at 1698.307 kb on + strand, within ABZR86_RS07655 at 1698.307 kb on + strand, within ABZR86_RS07655 at 1698.307 kb on + strand, within ABZR86_RS07655 at 1698.307 kb on + strand, within ABZR86_RS07655 at 1698.407 kb on - strand, within ABZR86_RS07655 at 1698.407 kb on - strand, within ABZR86_RS07655 at 1698.451 kb on + strand, within ABZR86_RS07655 at 1698.700 kb on + strand at 1698.700 kb on + strand at 1698.700 kb on + strand at 1698.701 kb on - strand at 1698.793 kb on + strand at 1698.823 kb on + strand at 1698.824 kb on - strand at 1698.884 kb on - strand at 1698.884 kb on - strand at 1698.884 kb on - strand at 1698.899 kb on - strand at 1699.019 kb on + strand at 1699.019 kb on + strand at 1699.036 kb on + strand at 1699.036 kb on + strand at 1699.036 kb on + strand at 1699.036 kb on + strand at 1699.037 kb on - strand at 1699.037 kb on - strand at 1699.037 kb on - strand at 1699.037 kb on - strand at 1699.037 kb on - strand at 1699.037 kb on - strand at 1699.684 kb on + strand, within ABZR86_RS07660 at 1700.228 kb on - strand, within ABZR86_RS07660 at 1701.470 kb on - strand, within ABZR86_RS07660 at 1701.590 kb on - strand, within ABZR86_RS07660 at 1701.590 kb on - strand, within ABZR86_RS07660 at 1701.683 kb on - strand, within ABZR86_RS07660 at 1701.715 kb on - strand, within ABZR86_RS07660 at 1701.715 kb on - strand, within ABZR86_RS07660 at 1701.719 kb on - strand, within ABZR86_RS07660 at 1701.877 kb on + strand, within ABZR86_RS07660 at 1701.878 kb on - strand, within ABZR86_RS07660 at 1702.162 kb on + strand, within ABZR86_RS07660 at 1702.253 kb on - strand, within ABZR86_RS07660 at 1702.253 kb on - strand, within ABZR86_RS07660 at 1702.620 kb on + strand at 1702.624 kb on + strand at 1702.624 kb on + strand at 1702.625 kb on - strand at 1702.625 kb on - strand at 1702.625 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.01 mg/ml remove 1,698,307 + ABZR86_RS07655 0.75 +0.5 1,698,307 + ABZR86_RS07655 0.75 +0.1 1,698,307 + ABZR86_RS07655 0.75 +0.5 1,698,307 + ABZR86_RS07655 0.75 +0.5 1,698,307 + ABZR86_RS07655 0.75 +0.1 1,698,407 - ABZR86_RS07655 0.80 -0.6 1,698,407 - ABZR86_RS07655 0.80 -1.0 1,698,451 + ABZR86_RS07655 0.81 -0.0 1,698,700 + -0.7 1,698,700 + -0.2 1,698,700 + -0.1 1,698,701 - -1.3 1,698,793 + -0.7 1,698,823 + -0.7 1,698,824 - -0.1 1,698,884 - -0.3 1,698,884 - -1.1 1,698,884 - +0.5 1,698,899 - -0.4 1,699,019 + -0.6 1,699,019 + +0.5 1,699,036 + +0.5 1,699,036 + +0.3 1,699,036 + +0.2 1,699,036 + +0.0 1,699,037 - -0.9 1,699,037 - -0.4 1,699,037 - +0.2 1,699,037 - +0.3 1,699,037 - -0.1 1,699,037 - +0.3 1,699,684 + ABZR86_RS07660 0.12 -1.3 1,700,228 - ABZR86_RS07660 0.28 +0.0 1,701,470 - ABZR86_RS07660 0.64 -0.2 1,701,590 - ABZR86_RS07660 0.67 -0.3 1,701,590 - ABZR86_RS07660 0.67 -0.4 1,701,683 - ABZR86_RS07660 0.70 -1.4 1,701,715 - ABZR86_RS07660 0.71 -2.5 1,701,715 - ABZR86_RS07660 0.71 -0.8 1,701,719 - ABZR86_RS07660 0.71 -0.3 1,701,877 + ABZR86_RS07660 0.75 +0.1 1,701,878 - ABZR86_RS07660 0.75 -0.7 1,702,162 + ABZR86_RS07660 0.83 -0.3 1,702,253 - ABZR86_RS07660 0.86 -1.9 1,702,253 - ABZR86_RS07660 0.86 -0.4 1,702,620 + -0.5 1,702,624 + -2.2 1,702,624 + +0.3 1,702,625 - -2.3 1,702,625 - -2.2 1,702,625 - -0.1
Or see this region's nucleotide sequence