Experiment: A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS06910 and ABZR86_RS06915 are separated by 193 nucleotides ABZR86_RS06915 and ABZR86_RS06920 are separated by 115 nucleotides
ABZR86_RS06910: ABZR86_RS06910 - hypothetical protein, at 1,523,601 to 1,524,083
_RS06910
ABZR86_RS06915: ABZR86_RS06915 - hypothetical protein, at 1,524,277 to 1,524,645
_RS06915
ABZR86_RS06920: ABZR86_RS06920 - hypothetical protein, at 1,524,761 to 1,525,222
_RS06920
Position (kb)
1523
1524
1525 Strain fitness (log2 ratio)
-2
-1
0
1 at 1522.632 kb on + strand at 1522.632 kb on + strand at 1522.632 kb on + strand at 1522.632 kb on + strand at 1522.632 kb on + strand at 1522.632 kb on + strand at 1522.633 kb on - strand at 1522.703 kb on + strand at 1522.712 kb on + strand at 1523.150 kb on - strand at 1523.281 kb on + strand at 1523.282 kb on - strand at 1523.436 kb on + strand at 1523.436 kb on + strand at 1523.436 kb on + strand at 1523.436 kb on + strand at 1523.436 kb on + strand at 1523.436 kb on + strand at 1523.436 kb on + strand at 1523.436 kb on + strand at 1523.436 kb on + strand at 1523.436 kb on + strand at 1523.437 kb on - strand at 1523.437 kb on - strand at 1523.437 kb on - strand at 1523.437 kb on - strand at 1523.437 kb on - strand at 1523.548 kb on + strand at 1523.549 kb on - strand at 1523.611 kb on - strand at 1523.611 kb on - strand at 1523.649 kb on + strand at 1523.649 kb on + strand at 1523.650 kb on - strand, within ABZR86_RS06910 at 1523.720 kb on + strand, within ABZR86_RS06910 at 1523.720 kb on + strand, within ABZR86_RS06910 at 1523.720 kb on + strand, within ABZR86_RS06910 at 1523.728 kb on - strand, within ABZR86_RS06910 at 1524.035 kb on - strand at 1524.219 kb on + strand at 1524.220 kb on - strand at 1524.220 kb on - strand at 1524.220 kb on - strand at 1524.251 kb on + strand at 1524.252 kb on - strand at 1524.315 kb on + strand, within ABZR86_RS06915 at 1524.316 kb on - strand, within ABZR86_RS06915 at 1524.316 kb on - strand, within ABZR86_RS06915 at 1524.353 kb on - strand, within ABZR86_RS06915 at 1524.390 kb on - strand, within ABZR86_RS06915 at 1524.396 kb on - strand, within ABZR86_RS06915 at 1524.396 kb on - strand, within ABZR86_RS06915 at 1524.405 kb on + strand, within ABZR86_RS06915 at 1524.431 kb on - strand, within ABZR86_RS06915 at 1524.431 kb on - strand, within ABZR86_RS06915 at 1524.527 kb on + strand, within ABZR86_RS06915 at 1524.528 kb on - strand, within ABZR86_RS06915 at 1524.560 kb on + strand, within ABZR86_RS06915 at 1524.561 kb on - strand, within ABZR86_RS06915 at 1524.599 kb on - strand, within ABZR86_RS06915 at 1524.738 kb on + strand at 1524.739 kb on - strand at 1524.739 kb on - strand at 1524.819 kb on + strand, within ABZR86_RS06920 at 1524.819 kb on + strand, within ABZR86_RS06920 at 1524.820 kb on - strand, within ABZR86_RS06920 at 1524.855 kb on + strand, within ABZR86_RS06920 at 1524.855 kb on + strand, within ABZR86_RS06920 at 1524.855 kb on + strand, within ABZR86_RS06920 at 1524.856 kb on - strand, within ABZR86_RS06920 at 1524.861 kb on + strand, within ABZR86_RS06920 at 1524.862 kb on - strand, within ABZR86_RS06920 at 1524.862 kb on - strand, within ABZR86_RS06920 at 1525.044 kb on + strand, within ABZR86_RS06920 at 1525.068 kb on + strand, within ABZR86_RS06920 at 1525.069 kb on - strand, within ABZR86_RS06920
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.01 mg/ml remove 1,522,632 + -0.4 1,522,632 + +0.6 1,522,632 + +0.0 1,522,632 + +0.4 1,522,632 + -0.4 1,522,632 + +0.3 1,522,633 - +0.4 1,522,703 + -0.8 1,522,712 + +0.5 1,523,150 - +0.4 1,523,281 + -0.6 1,523,282 - +0.4 1,523,436 + +0.5 1,523,436 + -0.1 1,523,436 + -0.6 1,523,436 + +0.1 1,523,436 + -0.2 1,523,436 + +0.5 1,523,436 + +0.5 1,523,436 + -0.7 1,523,436 + -0.4 1,523,436 + +0.6 1,523,437 - +0.8 1,523,437 - -0.4 1,523,437 - -0.1 1,523,437 - +1.2 1,523,437 - -0.7 1,523,548 + -0.1 1,523,549 - +0.2 1,523,611 - -0.2 1,523,611 - +0.4 1,523,649 + +0.9 1,523,649 + -1.1 1,523,650 - ABZR86_RS06910 0.10 -0.2 1,523,720 + ABZR86_RS06910 0.25 +0.5 1,523,720 + ABZR86_RS06910 0.25 +0.3 1,523,720 + ABZR86_RS06910 0.25 +0.3 1,523,728 - ABZR86_RS06910 0.26 +0.1 1,524,035 - -0.1 1,524,219 + +0.0 1,524,220 - -0.4 1,524,220 - -0.3 1,524,220 - -1.8 1,524,251 + +0.3 1,524,252 - -0.5 1,524,315 + ABZR86_RS06915 0.10 +0.2 1,524,316 - ABZR86_RS06915 0.11 +0.9 1,524,316 - ABZR86_RS06915 0.11 +0.2 1,524,353 - ABZR86_RS06915 0.21 +0.0 1,524,390 - ABZR86_RS06915 0.31 +0.2 1,524,396 - ABZR86_RS06915 0.32 -0.3 1,524,396 - ABZR86_RS06915 0.32 +0.3 1,524,405 + ABZR86_RS06915 0.35 +0.0 1,524,431 - ABZR86_RS06915 0.42 -0.1 1,524,431 - ABZR86_RS06915 0.42 +0.5 1,524,527 + ABZR86_RS06915 0.68 +0.2 1,524,528 - ABZR86_RS06915 0.68 +0.7 1,524,560 + ABZR86_RS06915 0.77 +0.0 1,524,561 - ABZR86_RS06915 0.77 +0.5 1,524,599 - ABZR86_RS06915 0.87 +0.9 1,524,738 + -0.2 1,524,739 - +0.2 1,524,739 - +0.3 1,524,819 + ABZR86_RS06920 0.13 -1.5 1,524,819 + ABZR86_RS06920 0.13 -0.5 1,524,820 - ABZR86_RS06920 0.13 -0.1 1,524,855 + ABZR86_RS06920 0.20 -0.1 1,524,855 + ABZR86_RS06920 0.20 +0.5 1,524,855 + ABZR86_RS06920 0.20 +0.3 1,524,856 - ABZR86_RS06920 0.21 -0.2 1,524,861 + ABZR86_RS06920 0.22 +0.1 1,524,862 - ABZR86_RS06920 0.22 -0.1 1,524,862 - ABZR86_RS06920 0.22 -1.6 1,525,044 + ABZR86_RS06920 0.61 +0.3 1,525,068 + ABZR86_RS06920 0.66 +0.2 1,525,069 - ABZR86_RS06920 0.67 +0.2
Or see this region's nucleotide sequence