Experiment: A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS02990 and ABZR86_RS02995 are separated by 44 nucleotides ABZR86_RS02995 and ABZR86_RS03000 are separated by 420 nucleotides
ABZR86_RS02990: ABZR86_RS02990 - enterotoxin A family protein, at 611,554 to 612,549
_RS02990
ABZR86_RS02995: ABZR86_RS02995 - hypothetical protein, at 612,594 to 613,526
_RS02995
ABZR86_RS03000: ABZR86_RS03000 - SDR family oxidoreductase, at 613,947 to 614,951
_RS03000
Position (kb) 612
613
614 Strain fitness (log2 ratio) -1
0
1 at 611.879 kb on + strand, within ABZR86_RS02990 at 611.879 kb on + strand, within ABZR86_RS02990 at 611.879 kb on + strand, within ABZR86_RS02990 at 611.915 kb on + strand, within ABZR86_RS02990 at 611.915 kb on + strand, within ABZR86_RS02990 at 611.915 kb on + strand, within ABZR86_RS02990 at 611.916 kb on - strand, within ABZR86_RS02990 at 611.984 kb on - strand, within ABZR86_RS02990 at 612.195 kb on + strand, within ABZR86_RS02990 at 612.203 kb on + strand, within ABZR86_RS02990 at 612.231 kb on - strand, within ABZR86_RS02990 at 612.236 kb on + strand, within ABZR86_RS02990 at 612.236 kb on + strand, within ABZR86_RS02990 at 612.236 kb on + strand, within ABZR86_RS02990 at 612.236 kb on + strand, within ABZR86_RS02990 at 612.237 kb on - strand, within ABZR86_RS02990 at 612.237 kb on - strand, within ABZR86_RS02990 at 612.239 kb on - strand, within ABZR86_RS02990 at 612.356 kb on - strand, within ABZR86_RS02990 at 612.371 kb on + strand, within ABZR86_RS02990 at 612.371 kb on + strand, within ABZR86_RS02990 at 612.525 kb on - strand at 612.528 kb on + strand at 612.528 kb on + strand at 612.684 kb on - strand at 612.768 kb on + strand, within ABZR86_RS02995 at 612.941 kb on - strand, within ABZR86_RS02995 at 613.034 kb on + strand, within ABZR86_RS02995 at 613.034 kb on + strand, within ABZR86_RS02995 at 613.035 kb on - strand, within ABZR86_RS02995 at 613.083 kb on + strand, within ABZR86_RS02995 at 613.087 kb on + strand, within ABZR86_RS02995 at 613.088 kb on - strand, within ABZR86_RS02995 at 613.088 kb on - strand, within ABZR86_RS02995 at 613.232 kb on - strand, within ABZR86_RS02995 at 613.237 kb on + strand, within ABZR86_RS02995 at 613.237 kb on + strand, within ABZR86_RS02995 at 613.246 kb on + strand, within ABZR86_RS02995 at 613.246 kb on + strand, within ABZR86_RS02995 at 613.247 kb on - strand, within ABZR86_RS02995 at 613.250 kb on + strand, within ABZR86_RS02995 at 613.251 kb on - strand, within ABZR86_RS02995 at 613.306 kb on - strand, within ABZR86_RS02995 at 613.407 kb on + strand, within ABZR86_RS02995 at 613.435 kb on + strand at 613.579 kb on + strand at 613.580 kb on - strand at 614.194 kb on - strand, within ABZR86_RS03000 at 614.525 kb on + strand, within ABZR86_RS03000 at 614.525 kb on + strand, within ABZR86_RS03000 at 614.526 kb on - strand, within ABZR86_RS03000 at 614.526 kb on - strand, within ABZR86_RS03000 at 614.526 kb on - strand, within ABZR86_RS03000
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.01 mg/ml remove 611,879 + ABZR86_RS02990 0.33 -0.0 611,879 + ABZR86_RS02990 0.33 +0.5 611,879 + ABZR86_RS02990 0.33 -0.6 611,915 + ABZR86_RS02990 0.36 +0.1 611,915 + ABZR86_RS02990 0.36 +0.3 611,915 + ABZR86_RS02990 0.36 -0.5 611,916 - ABZR86_RS02990 0.36 +0.0 611,984 - ABZR86_RS02990 0.43 -0.1 612,195 + ABZR86_RS02990 0.64 +0.5 612,203 + ABZR86_RS02990 0.65 -0.4 612,231 - ABZR86_RS02990 0.68 +0.1 612,236 + ABZR86_RS02990 0.68 -0.5 612,236 + ABZR86_RS02990 0.68 +0.0 612,236 + ABZR86_RS02990 0.68 +0.0 612,236 + ABZR86_RS02990 0.68 -0.3 612,237 - ABZR86_RS02990 0.69 -0.1 612,237 - ABZR86_RS02990 0.69 -0.6 612,239 - ABZR86_RS02990 0.69 -0.3 612,356 - ABZR86_RS02990 0.81 +0.1 612,371 + ABZR86_RS02990 0.82 +0.7 612,371 + ABZR86_RS02990 0.82 +0.6 612,525 - +0.3 612,528 + +0.1 612,528 + -0.2 612,684 - -1.1 612,768 + ABZR86_RS02995 0.19 +0.3 612,941 - ABZR86_RS02995 0.37 -0.4 613,034 + ABZR86_RS02995 0.47 -0.0 613,034 + ABZR86_RS02995 0.47 +0.0 613,035 - ABZR86_RS02995 0.47 -0.1 613,083 + ABZR86_RS02995 0.52 -0.2 613,087 + ABZR86_RS02995 0.53 -0.0 613,088 - ABZR86_RS02995 0.53 -1.0 613,088 - ABZR86_RS02995 0.53 +1.3 613,232 - ABZR86_RS02995 0.68 +0.1 613,237 + ABZR86_RS02995 0.69 -0.3 613,237 + ABZR86_RS02995 0.69 +0.5 613,246 + ABZR86_RS02995 0.70 +0.4 613,246 + ABZR86_RS02995 0.70 +0.7 613,247 - ABZR86_RS02995 0.70 -0.1 613,250 + ABZR86_RS02995 0.70 +0.7 613,251 - ABZR86_RS02995 0.70 -0.4 613,306 - ABZR86_RS02995 0.76 +1.0 613,407 + ABZR86_RS02995 0.87 +0.1 613,435 + +1.2 613,579 + -0.3 613,580 - +0.1 614,194 - ABZR86_RS03000 0.25 -0.5 614,525 + ABZR86_RS03000 0.58 -0.6 614,525 + ABZR86_RS03000 0.58 +0.3 614,526 - ABZR86_RS03000 0.58 -0.1 614,526 - ABZR86_RS03000 0.58 -1.4 614,526 - ABZR86_RS03000 0.58 -0.8
Or see this region's nucleotide sequence