Experiment: A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS02245 and ABZR86_RS02250 are separated by 71 nucleotides ABZR86_RS02250 and ABZR86_RS02255 are separated by 48 nucleotides ABZR86_RS02255 and ABZR86_RS02260 are separated by 157 nucleotides ABZR86_RS02260 and ABZR86_RS02265 are separated by 82 nucleotides ABZR86_RS02265 and ABZR86_RS02270 are separated by 158 nucleotides ABZR86_RS02270 and ABZR86_RS02275 are separated by 174 nucleotides
ABZR86_RS02245: ABZR86_RS02245 - excinuclease ABC subunit UvrC, at 482,215 to 484,041
_RS02245
ABZR86_RS02250: ABZR86_RS02250 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 484,113 to 484,730
_RS02250
ABZR86_RS02255: ABZR86_RS02255 - tRNA-Gly, at 484,779 to 484,854
_RS02255
ABZR86_RS02260: ABZR86_RS02260 - tRNA-Gly, at 485,012 to 485,087
_RS02260
ABZR86_RS02265: ABZR86_RS02265 - tRNA-Cys, at 485,170 to 485,243
_RS02265
ABZR86_RS02270: ABZR86_RS02270 - tRNA-Leu, at 485,402 to 485,488
_RS02270
ABZR86_RS02275: ABZR86_RS02275 - integrase arm-type DNA-binding domain-containing protein, at 485,663 to 486,871
_RS02275
Position (kb) 484
485 Strain fitness (log2 ratio) -2
-1
0
1 at 484.021 kb on + strand at 484.021 kb on + strand at 484.021 kb on + strand at 484.021 kb on + strand at 484.022 kb on - strand at 484.022 kb on - strand at 484.022 kb on - strand at 484.022 kb on - strand at 484.022 kb on - strand at 484.022 kb on - strand at 484.022 kb on - strand at 484.112 kb on + strand at 484.112 kb on + strand at 484.112 kb on + strand at 484.112 kb on + strand at 484.112 kb on + strand at 484.112 kb on + strand at 484.112 kb on + strand at 484.112 kb on + strand at 484.112 kb on + strand at 484.112 kb on + strand at 484.727 kb on - strand at 484.760 kb on + strand at 484.760 kb on + strand at 484.760 kb on + strand at 484.786 kb on + strand at 484.786 kb on + strand at 484.786 kb on + strand at 484.798 kb on + strand, within ABZR86_RS02255 at 484.798 kb on + strand, within ABZR86_RS02255 at 484.798 kb on + strand, within ABZR86_RS02255 at 484.798 kb on + strand, within ABZR86_RS02255 at 484.941 kb on - strand at 485.128 kb on + strand at 485.306 kb on + strand at 485.306 kb on + strand at 485.306 kb on + strand at 485.306 kb on + strand at 485.306 kb on + strand at 485.306 kb on + strand at 485.307 kb on - strand at 485.307 kb on - strand at 485.357 kb on + strand at 485.357 kb on + strand at 485.357 kb on + strand at 485.357 kb on + strand at 485.357 kb on + strand at 485.357 kb on + strand at 485.357 kb on + strand at 485.357 kb on + strand at 485.358 kb on - strand at 485.358 kb on - strand at 485.358 kb on - strand at 485.358 kb on - strand at 485.358 kb on - strand at 485.358 kb on - strand at 485.358 kb on - strand at 485.519 kb on + strand at 485.520 kb on - strand at 485.520 kb on - strand at 485.523 kb on + strand at 485.524 kb on - strand at 485.524 kb on - strand at 485.543 kb on - strand at 485.543 kb on - strand at 485.572 kb on - strand at 485.621 kb on + strand at 485.622 kb on - strand at 485.622 kb on - strand at 485.622 kb on - strand at 485.622 kb on - strand at 485.656 kb on + strand at 485.656 kb on + strand at 485.656 kb on + strand at 485.668 kb on + strand at 485.668 kb on + strand at 485.669 kb on - strand at 485.669 kb on - strand at 485.669 kb on - strand at 485.712 kb on - strand at 485.712 kb on - strand at 485.806 kb on + strand, within ABZR86_RS02275 at 485.806 kb on + strand, within ABZR86_RS02275 at 485.806 kb on + strand, within ABZR86_RS02275 at 485.806 kb on + strand, within ABZR86_RS02275 at 485.807 kb on - strand, within ABZR86_RS02275 at 485.825 kb on + strand, within ABZR86_RS02275
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.01 mg/ml remove 484,021 + +0.5 484,021 + +0.7 484,021 + -0.5 484,021 + +0.4 484,022 - -0.8 484,022 - +0.4 484,022 - -1.3 484,022 - -0.1 484,022 - -1.0 484,022 - -0.9 484,022 - -0.3 484,112 + -0.2 484,112 + -0.8 484,112 + -1.4 484,112 + -0.3 484,112 + +0.0 484,112 + -0.7 484,112 + +0.2 484,112 + +0.2 484,112 + -1.5 484,112 + -0.1 484,727 - -2.7 484,760 + -0.6 484,760 + +0.4 484,760 + +0.2 484,786 + +0.4 484,786 + +1.1 484,786 + -1.6 484,798 + ABZR86_RS02255 0.25 -0.3 484,798 + ABZR86_RS02255 0.25 -1.5 484,798 + ABZR86_RS02255 0.25 +0.4 484,798 + ABZR86_RS02255 0.25 -0.0 484,941 - -0.3 485,128 + -0.1 485,306 + +0.2 485,306 + -0.8 485,306 + -0.4 485,306 + +0.6 485,306 + -0.1 485,306 + +0.2 485,307 - +0.1 485,307 - -1.8 485,357 + -0.3 485,357 + -0.7 485,357 + -0.3 485,357 + -0.1 485,357 + +0.5 485,357 + +0.1 485,357 + -0.1 485,357 + +0.4 485,358 - -0.5 485,358 - +0.3 485,358 - +0.3 485,358 - -0.6 485,358 - +0.1 485,358 - -0.0 485,358 - +0.4 485,519 + +0.5 485,520 - +0.1 485,520 - -1.7 485,523 + -0.6 485,524 - -0.2 485,524 - +0.0 485,543 - -0.8 485,543 - -0.5 485,572 - +0.8 485,621 + -0.1 485,622 - -0.8 485,622 - +0.6 485,622 - -0.6 485,622 - -0.2 485,656 + -0.4 485,656 + +0.2 485,656 + +0.3 485,668 + -0.3 485,668 + +0.0 485,669 - +0.8 485,669 - +0.1 485,669 - +1.4 485,712 - -0.1 485,712 - +0.6 485,806 + ABZR86_RS02275 0.12 -0.4 485,806 + ABZR86_RS02275 0.12 +1.1 485,806 + ABZR86_RS02275 0.12 -0.1 485,806 + ABZR86_RS02275 0.12 +0.3 485,807 - ABZR86_RS02275 0.12 -0.2 485,825 + ABZR86_RS02275 0.13 -0.2
Or see this region's nucleotide sequence