Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_3181
Experiment: MoYLS4 with Vancomycin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Vancomycin 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,011,149 | + | DvMF_3180 | 0.28 | -0.8 | |
4,011,149 | + | DvMF_3180 | 0.28 | -2.7 | |
4,011,265 | - | DvMF_3180 | 0.43 | -1.8 | |
4,011,424 | - | DvMF_3180 | 0.65 | -0.8 | |
4,011,605 | - | DvMF_3180 | 0.89 | -1.0 | |
4,011,649 | + | -1.8 | |||
4,011,795 | - | -0.1 | |||
4,011,881 | - | +0.3 | |||
4,011,904 | - | +0.1 | |||
4,012,014 | - | -1.0 | |||
4,012,099 | - | -0.8 | |||
4,012,384 | - | DvMF_3181 | 0.17 | -0.5 | |
4,012,657 | + | DvMF_3181 | 0.30 | +0.4 | |
4,013,135 | - | DvMF_3181 | 0.53 | -1.6 | |
4,013,140 | - | DvMF_3181 | 0.53 | +0.9 | |
4,013,149 | + | DvMF_3181 | 0.54 | -0.5 | |
4,013,433 | - | DvMF_3181 | 0.67 | -1.7 | |
4,013,561 | - | DvMF_3181 | 0.73 | -0.1 | |
4,013,802 | - | DvMF_3181 | 0.85 | -0.8 | |
4,014,478 | - | -0.2 | |||
4,014,587 | + | DvMF_3182 | 0.12 | -2.7 | |
4,014,636 | + | DvMF_3182 | 0.21 | -0.4 | |
4,014,688 | - | DvMF_3182 | 0.31 | -1.0 | |
4,014,865 | + | DvMF_3182 | 0.66 | -0.3 | |
4,014,865 | + | DvMF_3182 | 0.66 | -0.7 | |
4,014,905 | - | DvMF_3182 | 0.73 | -0.3 | |
4,014,975 | - | DvMF_3182 | 0.87 | -0.2 |
Or see this region's nucleotide sequence