Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_3053
Experiment: MoYLS4 with Vancomycin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Vancomycin 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,853,600 | + | -0.5 | |||
3,853,733 | - | DvMF_3052 | 0.15 | -0.6 | |
3,853,761 | - | DvMF_3052 | 0.18 | -1.7 | |
3,853,800 | - | DvMF_3052 | 0.23 | -0.9 | |
3,853,811 | + | DvMF_3052 | 0.24 | -0.6 | |
3,853,818 | - | DvMF_3052 | 0.25 | -2.8 | |
3,853,858 | - | DvMF_3052 | 0.30 | -0.5 | |
3,853,866 | + | DvMF_3052 | 0.30 | -0.3 | |
3,853,897 | - | DvMF_3052 | 0.34 | -2.5 | |
3,854,028 | + | DvMF_3052 | 0.49 | -0.5 | |
3,854,505 | + | -1.2 | |||
3,854,702 | + | DvMF_3053 | 0.30 | -0.5 | |
3,854,702 | + | DvMF_3053 | 0.30 | -0.6 | |
3,854,702 | + | DvMF_3053 | 0.30 | -0.5 | |
3,854,710 | - | DvMF_3053 | 0.31 | +1.2 | |
3,854,809 | - | DvMF_3053 | 0.43 | -0.4 | |
3,855,109 | - | DvMF_3053 | 0.80 | -0.5 | |
3,855,133 | - | DvMF_3053 | 0.83 | -0.4 | |
3,855,231 | - | -2.0 | |||
3,855,378 | + | DvMF_3054 | 0.11 | -1.0 | |
3,855,532 | + | DvMF_3054 | 0.27 | -1.1 | |
3,855,833 | + | DvMF_3054 | 0.57 | -0.6 | |
3,856,109 | - | DvMF_3054 | 0.86 | -0.9 | |
3,856,109 | - | DvMF_3054 | 0.86 | -0.8 | |
3,856,219 | + | -0.3 |
Or see this region's nucleotide sequence