Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2810
Experiment: MoYLS4 with Vancomycin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Vancomycin 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,552,459 | - | DvMF_2809 | 0.57 | -0.8 | |
3,552,506 | + | DvMF_2809 | 0.61 | -1.0 | |
3,552,523 | + | DvMF_2809 | 0.62 | -1.9 | |
3,552,524 | - | DvMF_2809 | 0.62 | -0.6 | |
3,552,775 | + | DvMF_2809 | 0.85 | -1.3 | |
3,552,815 | + | DvMF_2809 | 0.89 | -0.4 | |
3,552,823 | - | DvMF_2809 | 0.89 | -1.3 | |
3,553,313 | + | -0.9 | |||
3,553,313 | + | -0.5 | |||
3,553,313 | + | +0.6 | |||
3,554,261 | - | +0.2 | |||
3,554,523 | + | DvMF_2811 | 0.33 | +0.1 | |
3,554,717 | + | DvMF_2811 | 0.54 | -0.1 | |
3,554,786 | + | DvMF_2811 | 0.62 | -1.2 | |
3,554,880 | + | DvMF_2811 | 0.72 | +2.2 | |
3,554,969 | - | DvMF_2811 | 0.82 | -0.4 | |
3,555,021 | - | DvMF_2811 | 0.88 | +0.4 | |
3,555,127 | + | -1.4 | |||
3,555,128 | - | -0.5 | |||
3,555,144 | + | -1.5 | |||
3,555,146 | + | +0.0 | |||
3,555,154 | - | -0.8 |
Or see this region's nucleotide sequence