Experiment: MoYLS4 with Vancomycin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2751 and DvMF_2752 overlap by 4 nucleotides DvMF_2752 and DvMF_2753 overlap by 4 nucleotides DvMF_2753 and DvMF_2754 are separated by 276 nucleotides
DvMF_2751: DvMF_2751 - inner-membrane translocator (RefSeq), at 3,476,605 to 3,477,510
_2751
DvMF_2752: DvMF_2752 - inner-membrane translocator (RefSeq), at 3,477,507 to 3,478,499
_2752
DvMF_2753: DvMF_2753 - ABC transporter related (RefSeq), at 3,478,496 to 3,479,263
_2753
DvMF_2754: DvMF_2754 - ABC transporter related (RefSeq), at 3,479,540 to 3,480,256
_2754
Position (kb)
3478
3479
3480 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3477.719 kb on + strand, within DvMF_2752 at 3477.997 kb on - strand, within DvMF_2752 at 3478.002 kb on - strand, within DvMF_2752 at 3478.009 kb on + strand, within DvMF_2752 at 3478.132 kb on - strand, within DvMF_2752 at 3478.236 kb on - strand, within DvMF_2752 at 3478.272 kb on - strand, within DvMF_2752 at 3478.351 kb on + strand, within DvMF_2752 at 3478.351 kb on + strand, within DvMF_2752 at 3478.856 kb on - strand, within DvMF_2753 at 3478.921 kb on - strand, within DvMF_2753 at 3479.065 kb on + strand, within DvMF_2753 at 3479.227 kb on + strand at 3479.313 kb on - strand at 3479.570 kb on + strand at 3479.578 kb on - strand at 3479.588 kb on + strand at 3479.596 kb on - strand at 3479.657 kb on + strand, within DvMF_2754 at 3479.696 kb on - strand, within DvMF_2754 at 3479.719 kb on + strand, within DvMF_2754 at 3480.006 kb on - strand, within DvMF_2754
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Vancomycin 0.5 mg/ml remove 3,477,719 + DvMF_2752 0.21 -0.4 3,477,997 - DvMF_2752 0.49 -0.4 3,478,002 - DvMF_2752 0.50 -1.5 3,478,009 + DvMF_2752 0.51 -2.5 3,478,132 - DvMF_2752 0.63 -0.4 3,478,236 - DvMF_2752 0.73 -0.6 3,478,272 - DvMF_2752 0.77 -0.4 3,478,351 + DvMF_2752 0.85 -1.4 3,478,351 + DvMF_2752 0.85 -0.3 3,478,856 - DvMF_2753 0.47 -0.7 3,478,921 - DvMF_2753 0.55 +2.8 3,479,065 + DvMF_2753 0.74 -2.4 3,479,227 + -0.6 3,479,313 - -1.1 3,479,570 + +0.1 3,479,578 - -1.1 3,479,588 + -0.6 3,479,596 - -0.0 3,479,657 + DvMF_2754 0.16 -0.5 3,479,696 - DvMF_2754 0.22 -0.5 3,479,719 + DvMF_2754 0.25 -0.2 3,480,006 - DvMF_2754 0.65 -0.2
Or see this region's nucleotide sequence