Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2290
Experiment: MoYLS4 with Vancomycin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Vancomycin 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,876,977 | - | DvMF_2288 | 0.82 | -0.0 | |
2,877,330 | + | DvMF_2289 | 0.25 | +1.9 | |
2,877,354 | - | DvMF_2289 | 0.28 | +1.8 | |
2,877,360 | - | DvMF_2289 | 0.28 | +1.9 | |
2,877,673 | - | DvMF_2289 | 0.69 | +1.3 | |
2,877,730 | + | DvMF_2289 | 0.77 | +1.1 | |
2,877,949 | - | +0.5 | |||
2,877,964 | + | -0.3 | |||
2,878,154 | + | DvMF_2290 | 0.13 | +1.2 | |
2,878,164 | - | DvMF_2290 | 0.14 | +1.5 | |
2,878,399 | - | DvMF_2290 | 0.31 | +1.6 | |
2,878,866 | + | DvMF_2290 | 0.64 | +1.2 | |
2,878,905 | - | DvMF_2290 | 0.67 | +1.4 | |
2,878,905 | - | DvMF_2290 | 0.67 | +1.3 | |
2,879,295 | - | +1.3 | |||
2,879,713 | + | DvMF_2291 | 0.12 | +0.0 | |
2,879,729 | - | DvMF_2291 | 0.14 | +1.5 | |
2,879,729 | - | DvMF_2291 | 0.14 | +0.5 | |
2,879,914 | - | DvMF_2291 | 0.39 | +0.4 | |
2,879,988 | - | DvMF_2291 | 0.48 | +1.0 | |
2,880,082 | - | DvMF_2291 | 0.61 | +1.2 | |
2,880,176 | + | DvMF_2291 | 0.73 | -0.4 | |
2,880,184 | - | DvMF_2291 | 0.74 | +1.2 | |
2,880,328 | + | +7.3 | |||
2,880,336 | - | -0.6 |
Or see this region's nucleotide sequence