Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2100
Experiment: MoYLS4 with Vancomycin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Vancomycin 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,617,101 | + | DvMF_2099 | 0.81 | -2.3 | |
2,617,248 | + | -3.0 | |||
2,617,264 | + | -1.1 | |||
2,617,274 | + | -1.5 | |||
2,617,491 | + | -1.2 | |||
2,617,607 | + | -0.5 | |||
2,617,628 | + | -0.4 | |||
2,617,631 | - | -0.9 | |||
2,617,645 | - | +0.8 | |||
2,617,685 | + | -0.5 | |||
2,617,693 | - | -1.0 | |||
2,617,797 | - | -0.4 | |||
2,617,853 | - | -0.8 | |||
2,617,855 | + | -0.4 | |||
2,617,870 | - | -0.1 | |||
2,617,877 | - | -1.6 | |||
2,617,925 | - | -0.2 | |||
2,618,182 | + | DvMF_2100 | 0.33 | -1.3 | |
2,618,190 | - | DvMF_2100 | 0.34 | -0.4 | |
2,618,510 | - | DvMF_2100 | 0.67 | +2.2 | |
2,618,834 | - | -0.8 | |||
2,618,893 | - | -0.4 | |||
2,618,942 | + | -0.8 | |||
2,618,950 | - | -1.1 | |||
2,618,980 | - | -1.5 | |||
2,619,085 | - | +2.3 | |||
2,619,576 | - | DvMF_2101 | 0.29 | -1.0 |
Or see this region's nucleotide sequence