Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1959
Experiment: MoYLS4 with Vancomycin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Vancomycin 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,419,663 | - | DvMF_1957 | 0.82 | -0.5 | |
2,419,898 | + | -0.6 | |||
2,419,906 | - | -1.0 | |||
2,420,043 | - | potC | DvMF_1958 | 0.24 | -0.6 |
2,420,144 | - | potC | DvMF_1958 | 0.36 | +0.3 |
2,420,205 | + | potC | DvMF_1958 | 0.44 | -0.7 |
2,420,210 | + | potC | DvMF_1958 | 0.44 | -0.6 |
2,420,402 | - | potC | DvMF_1958 | 0.68 | -0.9 |
2,420,454 | + | potC | DvMF_1958 | 0.75 | -0.6 |
2,420,555 | + | potC | DvMF_1958 | 0.88 | -0.7 |
2,420,589 | - | +0.2 | |||
2,420,589 | - | -0.7 | |||
2,420,595 | + | -0.7 | |||
2,420,603 | - | -2.9 | |||
2,420,656 | - | -1.4 | |||
2,420,668 | - | -0.9 | |||
2,420,787 | + | DvMF_1959 | 0.14 | -1.3 | |
2,420,850 | - | DvMF_1959 | 0.20 | -0.4 | |
2,421,324 | + | DvMF_1959 | 0.69 | -1.7 | |
2,421,336 | + | DvMF_1959 | 0.70 | -0.6 | |
2,421,497 | - | DvMF_1959 | 0.87 | -0.9 | |
2,421,608 | + | -0.5 | |||
2,421,608 | + | +0.1 | |||
2,421,758 | - | potA | DvMF_1960 | 0.12 | -1.7 |
2,422,062 | + | potA | DvMF_1960 | 0.38 | -1.5 |
2,422,357 | - | potA | DvMF_1960 | 0.62 | -0.6 |
2,422,473 | - | potA | DvMF_1960 | 0.72 | -0.7 |
2,422,551 | + | potA | DvMF_1960 | 0.78 | -0.7 |
2,422,579 | + | potA | DvMF_1960 | 0.81 | -0.8 |
Or see this region's nucleotide sequence