Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1728
Experiment: MoYLS4 with Vancomycin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Vancomycin 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,110,212 | + | +0.4 | |||
2,110,235 | - | DvMF_1727 | 0.11 | -1.1 | |
2,110,580 | - | DvMF_1727 | 0.54 | -0.4 | |
2,110,606 | + | DvMF_1727 | 0.57 | -1.0 | |
2,110,655 | - | DvMF_1727 | 0.63 | -0.2 | |
2,110,778 | - | DvMF_1727 | 0.79 | +0.1 | |
2,110,792 | - | DvMF_1727 | 0.80 | -2.5 | |
2,110,794 | + | DvMF_1727 | 0.81 | -2.3 | |
2,111,095 | - | DvMF_1728 | 0.18 | -1.0 | |
2,111,122 | + | DvMF_1728 | 0.21 | +0.2 | |
2,111,175 | + | DvMF_1728 | 0.28 | -0.1 | |
2,111,272 | - | DvMF_1728 | 0.39 | -0.8 | |
2,111,539 | + | DvMF_1728 | 0.71 | -0.2 | |
2,111,681 | + | DvMF_1728 | 0.88 | -1.3 | |
2,111,865 | + | +0.4 | |||
2,111,905 | - | -2.2 | |||
2,111,920 | + | -0.5 | |||
2,112,001 | - | -1.2 | |||
2,112,192 | - | -0.4 | |||
2,112,752 | + | DvMF_1729 | 0.28 | +2.7 | |
2,112,760 | - | DvMF_1729 | 0.28 | +0.0 |
Or see this region's nucleotide sequence