Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1575
Experiment: MoYLS4 with Vancomycin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Vancomycin 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,941,107 | + | DvMF_1574 | 0.49 | +0.3 | |
1,941,199 | + | DvMF_1574 | 0.57 | +0.2 | |
1,941,338 | - | DvMF_1574 | 0.69 | +6.5 | |
1,941,899 | - | -0.4 | |||
1,941,940 | + | +1.0 | |||
1,942,272 | + | DvMF_1575 | 0.28 | -0.3 | |
1,942,399 | + | DvMF_1575 | 0.36 | +0.0 | |
1,942,453 | + | DvMF_1575 | 0.39 | -0.6 | |
1,942,463 | + | DvMF_1575 | 0.40 | -0.6 | |
1,942,835 | + | DvMF_1575 | 0.61 | -1.0 | |
1,942,843 | - | DvMF_1575 | 0.62 | -0.5 | |
1,942,904 | + | DvMF_1575 | 0.65 | -1.0 | |
1,942,919 | - | DvMF_1575 | 0.66 | -1.3 | |
1,942,964 | - | DvMF_1575 | 0.69 | -0.2 | |
1,943,062 | + | DvMF_1575 | 0.74 | -0.7 | |
1,943,140 | - | DvMF_1575 | 0.79 | -0.9 | |
1,943,374 | + | -1.7 | |||
1,943,488 | + | -0.7 | |||
1,943,496 | - | -0.1 | |||
1,943,717 | - | -0.2 | |||
1,943,719 | - | -1.7 | |||
1,943,780 | + | -0.2 | |||
1,943,942 | - | -0.3 | |||
1,943,972 | + | -0.2 | |||
1,944,261 | + | -0.4 | |||
1,944,351 | + | -0.5 | |||
1,944,361 | + | -0.5 | |||
1,944,371 | + | -0.7 |
Or see this region's nucleotide sequence