Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1566
Experiment: MoYLS4 with Vancomycin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Vancomycin 0.5 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,930,736 | + | DvMF_1565 | 0.18 | -1.2 | |
| 1,930,783 | + | DvMF_1565 | 0.25 | -1.3 | |
| 1,930,793 | + | DvMF_1565 | 0.26 | -0.8 | |
| 1,930,801 | - | DvMF_1565 | 0.27 | -1.1 | |
| 1,931,178 | + | DvMF_1565 | 0.82 | -1.3 | |
| 1,931,191 | - | DvMF_1565 | 0.84 | +0.3 | |
| 1,931,229 | + | DvMF_1565 | 0.89 | -0.8 | |
| 1,931,335 | + | -0.3 | |||
| 1,931,644 | - | DvMF_1566 | 0.11 | -0.8 | |
| 1,931,691 | + | DvMF_1566 | 0.13 | -0.8 | |
| 1,931,715 | - | DvMF_1566 | 0.14 | -1.0 | |
| 1,932,392 | - | DvMF_1566 | 0.51 | -1.2 | |
| 1,932,768 | - | DvMF_1566 | 0.71 | -1.4 | |
| 1,933,440 | + | -0.4 | |||
| 1,933,635 | - | DvMF_1567 | 0.13 | -0.3 | |
| 1,933,707 | + | DvMF_1567 | 0.19 | -0.4 | |
| 1,933,777 | + | DvMF_1567 | 0.23 | -0.5 | |
| 1,933,804 | + | DvMF_1567 | 0.25 | -0.9 | |
| 1,933,804 | + | DvMF_1567 | 0.25 | -0.3 | |
| 1,934,082 | - | DvMF_1567 | 0.45 | -0.2 | |
| 1,934,149 | + | DvMF_1567 | 0.50 | -1.8 |
Or see this region's nucleotide sequence