Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1152
Experiment: MoYLS4 with Vancomycin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Vancomycin 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,412,327 | - | DvMF_1151 | 0.69 | -0.5 | |
1,412,405 | + | DvMF_1151 | 0.78 | -0.6 | |
1,412,478 | + | DvMF_1151 | 0.86 | -0.7 | |
1,412,603 | + | -1.2 | |||
1,412,611 | - | -0.5 | |||
1,412,767 | + | -2.1 | |||
1,412,780 | - | -0.6 | |||
1,413,125 | - | -1.2 | |||
1,413,141 | - | -0.1 | |||
1,413,496 | - | DvMF_1152 | 0.21 | -0.5 | |
1,413,582 | - | DvMF_1152 | 0.28 | -1.4 | |
1,413,599 | + | DvMF_1152 | 0.30 | -0.7 | |
1,413,799 | + | DvMF_1152 | 0.47 | -1.4 | |
1,413,901 | + | DvMF_1152 | 0.56 | -0.4 | |
1,414,027 | + | DvMF_1152 | 0.67 | -1.0 | |
1,414,096 | - | DvMF_1152 | 0.73 | -1.1 | |
1,414,108 | + | DvMF_1152 | 0.74 | -0.4 | |
1,414,249 | - | DvMF_1152 | 0.86 | -0.3 | |
1,414,705 | + | -0.6 | |||
1,414,875 | - | DvMF_1153 | 0.19 | +0.2 | |
1,414,935 | - | DvMF_1153 | 0.23 | +0.7 | |
1,415,160 | - | DvMF_1153 | 0.41 | -0.7 | |
1,415,264 | - | DvMF_1153 | 0.49 | -0.6 | |
1,415,293 | + | DvMF_1153 | 0.51 | -1.1 | |
1,415,331 | - | DvMF_1153 | 0.54 | -1.0 | |
1,415,358 | + | DvMF_1153 | 0.56 | -1.4 | |
1,415,391 | - | DvMF_1153 | 0.58 | -1.2 |
Or see this region's nucleotide sequence