Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1122
Experiment: MoYLS4 with Vancomycin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Vancomycin 0.5 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,377,977 | + | -0.5 | |||
| 1,377,982 | + | -0.5 | |||
| 1,378,000 | + | +1.8 | |||
| 1,378,479 | + | +0.5 | |||
| 1,378,704 | - | +4.0 | |||
| 1,378,781 | - | +5.8 | |||
| 1,378,921 | + | +6.0 | |||
| 1,378,944 | + | DvMF_1122 | 0.10 | +5.4 | |
| 1,379,135 | - | DvMF_1122 | 0.24 | +6.0 | |
| 1,379,266 | + | DvMF_1122 | 0.33 | +6.2 | |
| 1,379,284 | - | DvMF_1122 | 0.34 | +8.5 | |
| 1,379,323 | - | DvMF_1122 | 0.37 | +6.1 | |
| 1,379,370 | + | DvMF_1122 | 0.40 | +6.3 | |
| 1,379,553 | + | DvMF_1122 | 0.52 | +5.8 | |
| 1,379,600 | - | DvMF_1122 | 0.56 | +6.2 | |
| 1,379,883 | - | DvMF_1122 | 0.75 | +5.3 | |
| 1,380,085 | - | DvMF_1122 | 0.89 | +5.3 | |
| 1,380,279 | - | +0.5 | |||
| 1,380,285 | - | +0.1 | |||
| 1,380,825 | - | -0.4 | |||
| 1,380,856 | + | -0.8 | |||
| 1,380,921 | - | -0.4 | |||
| 1,381,171 | + | DvMF_1124 | 0.45 | -0.4 | |
| 1,381,171 | + | DvMF_1124 | 0.45 | -0.0 |
Or see this region's nucleotide sequence