Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0788
Experiment: MoYLS4 with Vancomycin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Vancomycin 0.5 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 946,399 | - | DvMF_0787 | 0.84 | +1.6 | |
| 946,530 | + | +0.0 | |||
| 946,584 | + | -0.0 | |||
| 946,621 | - | -0.1 | |||
| 947,009 | + | +0.9 | |||
| 947,084 | - | -0.3 | |||
| 947,108 | - | -0.2 | |||
| 947,394 | - | DvMF_0788 | 0.18 | -1.9 | |
| 947,667 | - | DvMF_0788 | 0.34 | -1.7 | |
| 947,832 | - | DvMF_0788 | 0.44 | -1.9 | |
| 948,111 | + | DvMF_0788 | 0.60 | -2.1 | |
| 948,234 | - | DvMF_0788 | 0.67 | -3.1 | |
| 948,250 | - | DvMF_0788 | 0.68 | -2.0 | |
| 948,311 | - | DvMF_0788 | 0.71 | -4.4 | |
| 948,334 | - | DvMF_0788 | 0.73 | -1.3 | |
| 948,409 | - | DvMF_0788 | 0.77 | -3.1 | |
| 948,463 | + | DvMF_0788 | 0.80 | -3.0 | |
| 948,465 | + | DvMF_0788 | 0.80 | -2.6 | |
| 948,767 | - | -1.7 | |||
| 948,767 | - | -1.0 | |||
| 948,829 | + | -0.3 |
Or see this region's nucleotide sequence