Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3698

Experiment: Spectinomycin 0.0125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0125 mg/ml
4,313,015	-		Pf6N2E2_3697	0.35	-0.2
4,313,015	-		Pf6N2E2_3697	0.35	+0.2
4,313,085	+		Pf6N2E2_3697	0.43	+0.3
4,313,099	-		Pf6N2E2_3697	0.45	+0.6
4,313,129	+		Pf6N2E2_3697	0.48	+1.2
4,313,129	+		Pf6N2E2_3697	0.48	+0.3
4,313,129	+		Pf6N2E2_3697	0.48	-0.2
4,313,130	-		Pf6N2E2_3697	0.48	-0.3
4,313,130	-		Pf6N2E2_3697	0.48	+1.3
4,313,303	+		Pf6N2E2_3697	0.68	-0.1
4,313,303	+		Pf6N2E2_3697	0.68	+0.5
4,313,303	+		Pf6N2E2_3697	0.68	+0.4
4,313,304	-		Pf6N2E2_3697	0.69	+0.3
4,313,304	-		Pf6N2E2_3697	0.69	+0.6
4,313,419	+		Pf6N2E2_3697	0.82	-0.1
4,313,422	+		Pf6N2E2_3697	0.82	+0.5
4,313,423	-		Pf6N2E2_3697	0.82	+1.1
4,313,423	-		Pf6N2E2_3697	0.82	-0.4
4,313,590	+				+0.9
4,313,590	+				-0.2
4,313,591	-				+0.0
4,313,591	-				+1.1
4,313,593	+				-0.1
4,313,594	-				-0.1
4,313,594	-				+0.4
4,313,594	-				+0.8
4,313,807	+				+0.7
4,313,808	-				-0.4
4,313,808	-				-0.5
4,313,817	+				-0.8
4,313,817	+				+0.3
4,313,835	+				+0.6
4,313,835	+				+0.4
4,313,835	+				+0.7
4,313,836	-				+0.6
4,313,856	-				-1.3
4,313,856	-				+0.3
4,313,856	-				+0.6
4,313,968	-		Pf6N2E2_3698	0.23	-0.1
4,313,968	-		Pf6N2E2_3698	0.23	-1.3
4,314,063	+		Pf6N2E2_3698	0.38	-0.7
4,314,063	+		Pf6N2E2_3698	0.38	-0.3
4,314,063	+		Pf6N2E2_3698	0.38	-0.6
4,314,064	-		Pf6N2E2_3698	0.38	-0.2
4,314,423	+				-0.1
4,314,424	-				+0.2
4,314,517	+				-0.1
4,314,517	+				+0.2
4,314,517	+				+0.3
4,314,517	+				+0.1
4,314,517	+				-0.0
4,314,518	-				-0.4
4,314,518	-				+1.8
4,314,518	-				+0.5
4,314,518	-				-0.5
4,314,518	-				-0.5
4,314,518	-				+0.0
4,314,518	-				+0.2
4,314,518	-				+0.3
4,314,519	+				+0.1
4,314,519	+				-1.0
4,314,520	-				+0.1
4,314,520	-				+0.2
4,314,520	-				+0.2
4,314,521	+				+0.6
4,314,521	+				-0.6
4,314,521	+				+0.1
4,314,521	+				+1.0
4,314,521	+				+1.4
4,314,521	+				-0.3
4,314,521	+				-0.4
4,314,521	+				-0.2
4,314,521	+				+0.1
4,314,521	+				+0.7
4,314,521	+				-0.3
4,314,521	+				-0.2
4,314,521	+				-0.2
4,314,522	-				+0.2
4,314,522	-				+0.1
4,314,522	-				+0.7
4,314,522	-				-0.2
4,314,522	-				+0.1
4,314,522	-				-0.1
4,314,522	-				+0.2
4,314,522	-				+0.9
4,314,522	-				-0.4
4,314,522	-				-0.4
4,314,522	-				+0.2
4,314,522	-				-1.0
4,314,660	+		Pf6N2E2_3699	0.23	-0.2
4,314,661	-		Pf6N2E2_3699	0.23	-1.6
4,314,696	-		Pf6N2E2_3699	0.31	-0.3
4,314,738	+		Pf6N2E2_3699	0.41	-0.0
4,314,738	+		Pf6N2E2_3699	0.41	+0.4
4,314,738	+		Pf6N2E2_3699	0.41	+1.0
4,314,738	+		Pf6N2E2_3699	0.41	+0.1
4,314,738	+		Pf6N2E2_3699	0.41	+0.0
4,314,738	+		Pf6N2E2_3699	0.41	-0.2
4,314,738	+		Pf6N2E2_3699	0.41	+0.1
4,314,738	+		Pf6N2E2_3699	0.41	+0.1
4,314,739	-		Pf6N2E2_3699	0.42	+0.6
4,314,739	-		Pf6N2E2_3699	0.42	+1.4
4,314,739	-		Pf6N2E2_3699	0.42	+0.8
4,314,739	-		Pf6N2E2_3699	0.42	-0.3
4,314,856	-		Pf6N2E2_3699	0.69	+0.5
4,315,042	-				-0.7
4,315,042	-				+1.1
4,315,042	-				-0.1
4,315,042	-				-0.2
4,315,042	-				+0.6
4,315,098	+				-0.3
4,315,099	-				+0.1
4,315,099	-				+1.2
4,315,099	-				-0.4
4,315,185	+		Pf6N2E2_3700	0.16	+0.2
4,315,192	-		Pf6N2E2_3700	0.17	+0.4
4,315,192	-		Pf6N2E2_3700	0.17	+0.3
4,315,192	-		Pf6N2E2_3700	0.17	+0.6
4,315,192	-		Pf6N2E2_3700	0.17	+0.1
4,315,192	-		Pf6N2E2_3700	0.17	+1.0
4,315,245	+		Pf6N2E2_3700	0.21	+0.4
4,315,245	+		Pf6N2E2_3700	0.21	-0.4
4,315,245	+		Pf6N2E2_3700	0.21	+0.5
4,315,245	+		Pf6N2E2_3700	0.21	-0.2
4,315,245	+		Pf6N2E2_3700	0.21	+0.2
4,315,245	+		Pf6N2E2_3700	0.21	-0.1
4,315,245	+		Pf6N2E2_3700	0.21	+0.4
4,315,245	+		Pf6N2E2_3700	0.21	+0.7
4,315,246	-		Pf6N2E2_3700	0.21	-0.3
4,315,246	-		Pf6N2E2_3700	0.21	+0.1
4,315,246	-		Pf6N2E2_3700	0.21	+0.0
4,315,246	-		Pf6N2E2_3700	0.21	+0.8
4,315,246	-		Pf6N2E2_3700	0.21	+0.0
4,315,246	-		Pf6N2E2_3700	0.21	+0.4
4,315,246	-		Pf6N2E2_3700	0.21	-0.7
4,315,246	-		Pf6N2E2_3700	0.21	+0.2
4,315,246	-		Pf6N2E2_3700	0.21	+0.2
4,315,297	+		Pf6N2E2_3700	0.26	-0.1
4,315,297	+		Pf6N2E2_3700	0.26	-0.1
4,315,308	+		Pf6N2E2_3700	0.27	+1.0
4,315,308	+		Pf6N2E2_3700	0.27	-0.4
4,315,308	+		Pf6N2E2_3700	0.27	+0.5