Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1949

Experiment: Spectinomycin 0.0125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0125 mg/ml
2,310,235	-		Pf6N2E2_1948	0.39	-1.1
2,310,235	-		Pf6N2E2_1948	0.39	-0.7
2,310,235	-		Pf6N2E2_1948	0.39	-0.6
2,310,235	-		Pf6N2E2_1948	0.39	+0.4
2,310,259	-		Pf6N2E2_1948	0.40	+0.1
2,310,259	-		Pf6N2E2_1948	0.40	-0.2
2,310,282	+		Pf6N2E2_1948	0.42	+0.1
2,310,282	+		Pf6N2E2_1948	0.42	-0.1
2,310,394	+		Pf6N2E2_1948	0.50	+0.3
2,310,394	+		Pf6N2E2_1948	0.50	-0.3
2,310,395	-		Pf6N2E2_1948	0.50	+0.1
2,310,431	+		Pf6N2E2_1948	0.52	-0.2
2,310,496	-		Pf6N2E2_1948	0.57	+0.8
2,310,508	+		Pf6N2E2_1948	0.58	-0.1
2,310,509	-		Pf6N2E2_1948	0.58	+0.2
2,310,568	+		Pf6N2E2_1948	0.62	-0.0
2,310,634	+		Pf6N2E2_1948	0.67	+0.1
2,310,634	+		Pf6N2E2_1948	0.67	+0.1
2,310,718	+		Pf6N2E2_1948	0.72	-0.6
2,310,731	+		Pf6N2E2_1948	0.73	-0.8
2,311,129	+				-0.6
2,311,162	+				-0.1
2,311,355	-				+0.2
2,311,584	+		Pf6N2E2_1949	0.15	-0.5
2,311,585	-		Pf6N2E2_1949	0.15	-0.1
2,311,601	+		Pf6N2E2_1949	0.16	+0.6
2,311,602	-		Pf6N2E2_1949	0.16	+0.2
2,311,602	-		Pf6N2E2_1949	0.16	+0.9
2,311,602	-		Pf6N2E2_1949	0.16	+1.0
2,311,602	-		Pf6N2E2_1949	0.16	+0.2
2,311,629	+		Pf6N2E2_1949	0.17	-0.1
2,311,630	-		Pf6N2E2_1949	0.17	+1.9
2,311,668	+		Pf6N2E2_1949	0.18	-0.6
2,311,669	-		Pf6N2E2_1949	0.18	+1.1
2,311,669	-		Pf6N2E2_1949	0.18	+0.6
2,311,695	-		Pf6N2E2_1949	0.19	-0.4
2,311,803	+		Pf6N2E2_1949	0.22	+0.7
2,311,882	+		Pf6N2E2_1949	0.25	-0.4
2,311,883	-		Pf6N2E2_1949	0.25	-0.0
2,311,897	+		Pf6N2E2_1949	0.25	-1.1
2,311,941	-		Pf6N2E2_1949	0.26	+0.4
2,311,941	-		Pf6N2E2_1949	0.26	+0.5
2,311,944	+		Pf6N2E2_1949	0.27	-0.5
2,311,944	+		Pf6N2E2_1949	0.27	-1.5
2,311,944	+		Pf6N2E2_1949	0.27	-0.0
2,311,945	-		Pf6N2E2_1949	0.27	+0.1
2,311,945	-		Pf6N2E2_1949	0.27	+0.3
2,311,945	-		Pf6N2E2_1949	0.27	+0.5
2,311,945	-		Pf6N2E2_1949	0.27	+1.2
2,311,954	+		Pf6N2E2_1949	0.27	-0.8
2,311,986	+		Pf6N2E2_1949	0.28	+0.7
2,311,987	-		Pf6N2E2_1949	0.28	-0.2
2,311,987	-		Pf6N2E2_1949	0.28	-0.0
2,311,987	-		Pf6N2E2_1949	0.28	-1.0
2,311,990	+		Pf6N2E2_1949	0.28	+0.6
2,311,990	+		Pf6N2E2_1949	0.28	+0.3
2,311,990	+		Pf6N2E2_1949	0.28	-0.4
2,311,991	-		Pf6N2E2_1949	0.28	+0.2
2,311,991	-		Pf6N2E2_1949	0.28	-0.4
2,311,991	-		Pf6N2E2_1949	0.28	-0.1
2,311,991	-		Pf6N2E2_1949	0.28	+0.3
2,311,999	-		Pf6N2E2_1949	0.28	-0.4
2,312,038	+		Pf6N2E2_1949	0.30	-1.5
2,312,039	-		Pf6N2E2_1949	0.30	+0.0
2,312,080	-		Pf6N2E2_1949	0.31	-0.1
2,312,208	+		Pf6N2E2_1949	0.35	+0.7
2,312,208	+		Pf6N2E2_1949	0.35	+0.6
2,312,265	+		Pf6N2E2_1949	0.37	-1.6
2,312,265	+		Pf6N2E2_1949	0.37	-0.5
2,312,266	-		Pf6N2E2_1949	0.37	+0.1
2,312,266	-		Pf6N2E2_1949	0.37	+0.1
2,312,267	+		Pf6N2E2_1949	0.37	-0.5
2,312,267	+		Pf6N2E2_1949	0.37	+0.2
2,312,268	-		Pf6N2E2_1949	0.37	+0.8
2,312,329	+		Pf6N2E2_1949	0.39	+0.2
2,312,330	-		Pf6N2E2_1949	0.39	+0.5
2,312,330	-		Pf6N2E2_1949	0.39	-0.6
2,312,472	+				-1.3
2,312,543	-		Pf6N2E2_1949	0.46	-0.5
2,312,629	-		Pf6N2E2_1949	0.48	+0.1
2,312,651	-		Pf6N2E2_1949	0.49	-0.3
2,312,651	-		Pf6N2E2_1949	0.49	-0.3
2,312,670	-		Pf6N2E2_1949	0.50	+0.6
2,312,863	-		Pf6N2E2_1949	0.56	+0.7
2,313,050	+		Pf6N2E2_1949	0.62	+0.6
2,313,050	+		Pf6N2E2_1949	0.62	+0.5
2,313,089	-		Pf6N2E2_1949	0.63	+0.0
2,313,089	-		Pf6N2E2_1949	0.63	-0.4
2,313,089	-		Pf6N2E2_1949	0.63	+0.6
2,313,095	-		Pf6N2E2_1949	0.63	+0.4
2,313,160	+		Pf6N2E2_1949	0.65	-0.4
2,313,161	-		Pf6N2E2_1949	0.65	-1.2
2,313,219	-		Pf6N2E2_1949	0.67	+0.2
2,313,219	-		Pf6N2E2_1949	0.67	-2.1
2,313,235	+		Pf6N2E2_1949	0.67	+0.3
2,313,235	+		Pf6N2E2_1949	0.67	+0.3
2,313,235	+		Pf6N2E2_1949	0.67	+0.3
2,313,235	+		Pf6N2E2_1949	0.67	+1.0
2,313,235	+		Pf6N2E2_1949	0.67	+0.3
2,313,235	+		Pf6N2E2_1949	0.67	+0.1
2,313,235	+		Pf6N2E2_1949	0.67	+0.4
2,313,236	-		Pf6N2E2_1949	0.67	+0.2
2,313,236	-		Pf6N2E2_1949	0.67	-0.6
2,313,236	-		Pf6N2E2_1949	0.67	+1.5
2,313,236	-		Pf6N2E2_1949	0.67	+0.4
2,313,236	-		Pf6N2E2_1949	0.67	-0.8
2,313,288	+		Pf6N2E2_1949	0.69	+0.4
2,313,438	+		Pf6N2E2_1949	0.74	-0.8
2,313,438	+		Pf6N2E2_1949	0.74	+0.5
2,313,562	+		Pf6N2E2_1949	0.78	-0.2
2,313,563	-		Pf6N2E2_1949	0.78	-0.5
2,313,563	-		Pf6N2E2_1949	0.78	-0.9
2,313,563	-		Pf6N2E2_1949	0.78	+1.1
2,313,563	-		Pf6N2E2_1949	0.78	-0.4
2,313,563	-		Pf6N2E2_1949	0.78	-0.1
2,313,580	+		Pf6N2E2_1949	0.78	+0.6
2,313,580	+		Pf6N2E2_1949	0.78	+0.2
2,313,581	-		Pf6N2E2_1949	0.78	-0.3
2,313,581	-		Pf6N2E2_1949	0.78	+0.5
2,313,620	+		Pf6N2E2_1949	0.80	+0.2
2,313,620	+		Pf6N2E2_1949	0.80	+0.6
2,313,620	+		Pf6N2E2_1949	0.80	+0.6
2,313,620	+		Pf6N2E2_1949	0.80	+0.8
2,313,626	+		Pf6N2E2_1949	0.80	-0.3
2,313,626	+		Pf6N2E2_1949	0.80	-0.6
2,313,627	-		Pf6N2E2_1949	0.80	+0.5
2,313,717	+		Pf6N2E2_1949	0.83	+0.2
2,313,778	+		Pf6N2E2_1949	0.85	-0.1
2,313,778	+		Pf6N2E2_1949	0.85	-0.9
2,313,800	+		Pf6N2E2_1949	0.85	+0.5
2,313,800	+		Pf6N2E2_1949	0.85	-0.1
2,314,016	-				-1.0
2,314,032	+				-0.2
2,314,032	+				+0.8
2,314,032	+				-1.0
2,314,085	-				-0.8
2,314,158	+				+0.8
2,314,241	-				-1.3
2,314,241	-				+0.3
2,314,246	+				+1.4
2,314,247	-				-0.2
2,314,251	+				-0.7
2,314,252	-				+0.0
2,314,266	+				+1.1
2,314,358	-				+0.2
2,314,824	+		Pf6N2E2_1950	0.47	+0.4
2,314,824	+		Pf6N2E2_1950	0.47	-0.7
2,314,825	-		Pf6N2E2_1950	0.47	+0.3
2,314,825	-		Pf6N2E2_1950	0.47	+0.5
2,314,825	-		Pf6N2E2_1950	0.47	+0.4
2,314,825	-		Pf6N2E2_1950	0.47	+0.7
2,314,874	-		Pf6N2E2_1950	0.51	-0.2
2,314,942	+		Pf6N2E2_1950	0.57	-0.5
2,314,942	+		Pf6N2E2_1950	0.57	+0.2
2,314,943	-		Pf6N2E2_1950	0.57	+0.1
2,314,943	-		Pf6N2E2_1950	0.57	+0.9
2,314,944	+		Pf6N2E2_1950	0.57	-0.2
2,314,944	+		Pf6N2E2_1950	0.57	-0.2
2,315,013	+		Pf6N2E2_1950	0.63	-0.2
2,315,013	+		Pf6N2E2_1950	0.63	+0.6
2,315,014	-		Pf6N2E2_1950	0.63	-0.8
2,315,118	+		Pf6N2E2_1950	0.72	+0.9
2,315,118	+		Pf6N2E2_1950	0.72	+0.6
2,315,119	-		Pf6N2E2_1950	0.72	+0.2
2,315,119	-		Pf6N2E2_1950	0.72	-0.4
2,315,139	+		Pf6N2E2_1950	0.74	+0.7
2,315,139	+		Pf6N2E2_1950	0.74	+0.7
2,315,161	+		Pf6N2E2_1950	0.76	+0.0
2,315,162	-		Pf6N2E2_1950	0.76	-0.6
2,315,162	-		Pf6N2E2_1950	0.76	+0.9
2,315,242	+		Pf6N2E2_1950	0.82	+0.6