Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3609

Experiment: D-Cellobiose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C)
3,727,289	+		Ga0059261_3607	0.80	+1.0
3,727,289	+		Ga0059261_3607	0.80	-0.3
3,727,289	+		Ga0059261_3607	0.80	-1.2
3,727,289	+		Ga0059261_3607	0.80	-0.2
3,727,290	-		Ga0059261_3607	0.80	+0.4
3,727,290	-		Ga0059261_3607	0.80	-0.3
3,727,290	-		Ga0059261_3607	0.80	+0.3
3,727,381	-		Ga0059261_3607	0.84	+0.3
3,727,381	-		Ga0059261_3607	0.84	+0.9
3,727,381	-		Ga0059261_3607	0.84	-0.7
3,727,418	+		Ga0059261_3607	0.86	+0.4
3,727,419	-		Ga0059261_3607	0.86	+0.2
3,727,517	+		Ga0059261_3607	0.90	-0.2
3,727,518	-		Ga0059261_3607	0.90	+0.1
3,727,518	-		Ga0059261_3607	0.90	-0.2
3,727,518	-		Ga0059261_3607	0.90	+0.4
3,727,595	+				-0.1
3,727,595	+				-0.4
3,727,595	+				+0.2
3,727,595	+				-0.7
3,727,595	+				-0.3
3,727,706	+				+0.5
3,727,706	+				-0.0
3,727,706	+				-0.0
3,727,706	+				-0.7
3,727,706	+				+0.1
3,727,754	+				+0.5
3,727,754	+				+0.1
3,727,755	-				+0.1
3,727,879	+				-0.1
3,727,880	-				-0.1
3,728,194	-				-1.2
3,728,194	-				-0.2
3,728,194	-				-0.3
3,728,194	-				+0.8
3,728,252	+		Ga0059261_3609	0.38	-0.3
3,728,252	+		Ga0059261_3609	0.38	+0.1
3,728,253	-		Ga0059261_3609	0.39	-2.0
3,728,253	-		Ga0059261_3609	0.39	-0.8
3,728,253	-		Ga0059261_3609	0.39	-0.7
3,728,253	-		Ga0059261_3609	0.39	+0.1
3,728,278	+		Ga0059261_3609	0.54	-1.3
3,728,278	+		Ga0059261_3609	0.54	-1.2
3,728,279	-		Ga0059261_3609	0.54	-0.4
3,728,279	-		Ga0059261_3609	0.54	-0.1
3,728,279	-		Ga0059261_3609	0.54	+0.3
3,728,414	+				+0.6
3,728,415	-				-0.1
3,728,415	-				+0.7
3,728,466	-				-0.6
3,728,466	-				+0.1
3,728,493	-				-0.5
3,728,520	-				+0.2
3,728,520	-				+0.4
3,728,520	-				+0.2
3,728,520	-				+0.3
3,728,540	+				-1.0
3,728,541	-				+0.4
3,728,586	+				-0.3
3,728,586	+				-0.1
3,728,587	-				+0.3
3,728,587	-				-0.0
3,728,587	-				+0.4
3,728,591	+				-1.2
3,728,591	+				-0.3
3,728,591	+				-0.1
3,728,591	+				+0.9
3,728,591	+				+0.1
3,728,591	+				+0.4
3,728,592	-				+0.0
3,728,592	-				-0.0
3,728,592	-				-0.6
3,728,592	-				-0.0
3,728,592	-				-0.5
3,728,592	-				+1.0
3,728,592	-				+0.1
3,728,592	-				-0.4
3,728,594	+				+0.1
3,728,594	+				-0.3
3,728,594	+				-0.0
3,728,594	+				-0.4
3,728,594	+				+0.2
3,728,595	-				+0.4
3,728,595	-				+0.1
3,728,595	-				+0.2
3,728,595	-				+1.4
3,728,595	-				+0.1
3,728,595	-				-0.3
3,728,595	-				+0.0
3,728,595	-				+0.0
3,728,595	-				-2.4
3,728,618	+				+0.5
3,728,618	+				-0.3
3,728,618	+				+0.7
3,728,618	+				-0.1
3,728,618	+				-0.3
3,728,618	+				-0.2
3,728,618	+				+0.6
3,728,618	+				+1.1
3,728,619	-				-0.4
3,728,619	-				-0.5
3,728,684	+				+0.2
3,728,685	-				-0.2
3,728,702	+				+0.4
3,728,702	+				+0.8
3,728,702	+				-0.7
3,728,703	-				-1.8
3,728,703	-				-0.7
3,728,898	-		Ga0059261_3610	0.15	+1.4
3,728,903	+		Ga0059261_3610	0.15	+0.3
3,728,903	+		Ga0059261_3610	0.15	+1.7
3,728,903	+		Ga0059261_3610	0.15	+0.1
3,728,904	-		Ga0059261_3610	0.15	-0.4
3,728,904	-		Ga0059261_3610	0.15	+0.4
3,728,904	-		Ga0059261_3610	0.15	+0.7
3,728,904	-		Ga0059261_3610	0.15	-0.1
3,728,904	-		Ga0059261_3610	0.15	-1.2
3,729,026	+		Ga0059261_3610	0.20	-0.4
3,729,044	+		Ga0059261_3610	0.21	-0.0
3,729,044	+		Ga0059261_3610	0.21	+0.4
3,729,044	+		Ga0059261_3610	0.21	-0.9
3,729,045	-		Ga0059261_3610	0.21	-0.7
3,729,045	-		Ga0059261_3610	0.21	+0.2
3,729,045	-		Ga0059261_3610	0.21	-0.3
3,729,233	+		Ga0059261_3610	0.28	+0.6
3,729,233	+		Ga0059261_3610	0.28	-0.0
3,729,233	+		Ga0059261_3610	0.28	-0.3
3,729,234	-		Ga0059261_3610	0.28	+0.4
3,729,234	-		Ga0059261_3610	0.28	-0.3
3,729,234	-		Ga0059261_3610	0.28	+0.1
3,729,249	-		Ga0059261_3610	0.28	-1.7
3,729,249	-		Ga0059261_3610	0.28	-0.1
3,729,249	-		Ga0059261_3610	0.28	+0.1
3,729,249	-		Ga0059261_3610	0.28	-1.4
3,729,269	+		Ga0059261_3610	0.29	-0.1
3,729,270	-		Ga0059261_3610	0.29	-0.1
3,729,274	+		Ga0059261_3610	0.29	+0.7
3,729,274	+		Ga0059261_3610	0.29	-0.1
3,729,274	+		Ga0059261_3610	0.29	-1.3
3,729,274	+		Ga0059261_3610	0.29	+0.2
3,729,274	+		Ga0059261_3610	0.29	+0.6
3,729,274	+		Ga0059261_3610	0.29	-0.5
3,729,274	+		Ga0059261_3610	0.29	+0.4
3,729,274	+		Ga0059261_3610	0.29	-0.3
3,729,275	-		Ga0059261_3610	0.29	-0.8
3,729,275	-		Ga0059261_3610	0.29	-0.5
3,729,275	-		Ga0059261_3610	0.29	+0.1
3,729,275	-		Ga0059261_3610	0.29	-0.2
3,729,275	-		Ga0059261_3610	0.29	-1.0
3,729,275	-		Ga0059261_3610	0.29	-0.2
3,729,275	-		Ga0059261_3610	0.29	-0.1
3,729,275	-		Ga0059261_3610	0.29	-0.7
3,729,275	-		Ga0059261_3610	0.29	-0.0
3,729,278	+		Ga0059261_3610	0.29	-0.3
3,729,278	+		Ga0059261_3610	0.29	+0.2
3,729,278	+		Ga0059261_3610	0.29	-0.5
3,729,278	+		Ga0059261_3610	0.29	-0.8
3,729,278	+		Ga0059261_3610	0.29	-0.5
3,729,278	+		Ga0059261_3610	0.29	-1.0
3,729,278	+		Ga0059261_3610	0.29	+0.1
3,729,279	-		Ga0059261_3610	0.29	-0.2
3,729,279	-		Ga0059261_3610	0.29	-1.0
3,729,279	-		Ga0059261_3610	0.29	-0.1
3,729,279	-		Ga0059261_3610	0.29	-0.6
3,729,279	-		Ga0059261_3610	0.29	-0.9
3,729,279	-		Ga0059261_3610	0.29	-0.2
3,729,279	-		Ga0059261_3610	0.29	+0.2
3,729,282	+		Ga0059261_3610	0.30	+0.3
3,729,345	+		Ga0059261_3610	0.32	+0.5
3,729,347	+		Ga0059261_3610	0.32	+0.0
3,729,347	+		Ga0059261_3610	0.32	+0.3
3,729,347	+		Ga0059261_3610	0.32	-0.2
3,729,347	+		Ga0059261_3610	0.32	+0.2
3,729,347	+		Ga0059261_3610	0.32	-0.3
3,729,348	-		Ga0059261_3610	0.32	+1.0
3,729,348	-		Ga0059261_3610	0.32	-0.3
3,729,348	-		Ga0059261_3610	0.32	-0.0