Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3216 and Ac3H11_3217 are separated by 405 nucleotides Ac3H11_3217 and Ac3H11_3218 are separated by 220 nucleotides
Ac3H11_3216 - Flagellar hook-length control protein FliK, at 121,294 to 125,079
_3216
Ac3H11_3217 - Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1), at 125,485 to 126,645
_3217
Ac3H11_3218 - Response regulator NasT, at 126,866 to 127,504
_3218
Position (kb)
125
126
127 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 124.550 kb on + strand, within Ac3H11_3216 at 124.550 kb on + strand, within Ac3H11_3216 at 124.551 kb on - strand, within Ac3H11_3216 at 124.551 kb on - strand, within Ac3H11_3216 at 124.570 kb on - strand, within Ac3H11_3216 at 124.705 kb on + strand at 124.706 kb on - strand at 124.706 kb on - strand at 124.706 kb on - strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.788 kb on + strand at 124.790 kb on + strand at 124.790 kb on + strand at 124.790 kb on + strand at 124.790 kb on + strand at 124.790 kb on + strand at 124.790 kb on + strand at 124.791 kb on - strand at 124.791 kb on - strand at 124.791 kb on - strand at 124.846 kb on - strand at 124.846 kb on - strand at 124.846 kb on - strand at 124.846 kb on - strand at 124.987 kb on + strand at 124.987 kb on + strand at 124.987 kb on + strand at 124.987 kb on + strand at 124.991 kb on + strand at 124.991 kb on + strand at 124.991 kb on + strand at 124.991 kb on + strand at 124.991 kb on + strand at 124.991 kb on + strand at 124.991 kb on + strand at 125.091 kb on - strand at 125.096 kb on + strand at 125.121 kb on + strand at 125.121 kb on + strand at 125.122 kb on - strand at 125.122 kb on - strand at 125.142 kb on + strand at 125.143 kb on - strand at 125.173 kb on + strand at 125.174 kb on - strand at 125.174 kb on - strand at 125.174 kb on - strand at 125.302 kb on + strand at 125.302 kb on + strand at 125.369 kb on - strand at 125.373 kb on - strand at 125.373 kb on - strand at 125.415 kb on + strand at 125.448 kb on + strand at 125.449 kb on - strand at 125.449 kb on - strand at 125.486 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.538 kb on - strand at 125.556 kb on - strand at 125.556 kb on - strand at 125.687 kb on + strand, within Ac3H11_3217 at 125.687 kb on + strand, within Ac3H11_3217 at 125.687 kb on + strand, within Ac3H11_3217 at 125.687 kb on + strand, within Ac3H11_3217 at 125.687 kb on + strand, within Ac3H11_3217 at 125.687 kb on + strand, within Ac3H11_3217 at 125.687 kb on + strand, within Ac3H11_3217 at 125.688 kb on - strand, within Ac3H11_3217 at 125.688 kb on - strand, within Ac3H11_3217 at 125.688 kb on - strand, within Ac3H11_3217 at 125.688 kb on - strand, within Ac3H11_3217 at 125.688 kb on - strand, within Ac3H11_3217 at 125.688 kb on - strand, within Ac3H11_3217 at 125.699 kb on + strand, within Ac3H11_3217 at 125.699 kb on + strand, within Ac3H11_3217 at 125.699 kb on + strand, within Ac3H11_3217 at 125.699 kb on + strand, within Ac3H11_3217 at 125.700 kb on - strand, within Ac3H11_3217 at 125.700 kb on - strand, within Ac3H11_3217 at 125.700 kb on - strand, within Ac3H11_3217 at 125.705 kb on + strand, within Ac3H11_3217 at 125.705 kb on + strand, within Ac3H11_3217 at 125.706 kb on - strand, within Ac3H11_3217 at 125.748 kb on - strand, within Ac3H11_3217 at 125.748 kb on - strand, within Ac3H11_3217 at 125.748 kb on - strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 126.122 kb on + strand, within Ac3H11_3217 at 126.122 kb on + strand, within Ac3H11_3217 at 126.275 kb on + strand, within Ac3H11_3217 at 126.275 kb on + strand, within Ac3H11_3217 at 126.275 kb on + strand, within Ac3H11_3217 at 126.275 kb on + strand, within Ac3H11_3217 at 126.275 kb on + strand, within Ac3H11_3217 at 126.276 kb on - strand, within Ac3H11_3217 at 126.430 kb on + strand, within Ac3H11_3217 at 126.431 kb on - strand, within Ac3H11_3217 at 126.431 kb on - strand, within Ac3H11_3217 at 126.437 kb on + strand, within Ac3H11_3217 at 126.437 kb on + strand, within Ac3H11_3217 at 126.438 kb on - strand, within Ac3H11_3217 at 126.659 kb on + strand at 126.660 kb on - strand at 126.660 kb on - strand at 126.660 kb on - strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.685 kb on + strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.686 kb on - strand at 126.687 kb on + strand at 126.687 kb on + strand at 126.688 kb on - strand at 126.688 kb on - strand at 126.688 kb on - strand at 126.688 kb on - strand at 126.688 kb on - strand at 126.718 kb on - strand at 126.739 kb on + strand at 126.739 kb on + strand at 126.739 kb on + strand at 126.740 kb on - strand at 126.742 kb on + strand at 126.743 kb on - strand at 126.743 kb on - strand at 126.877 kb on + strand at 126.878 kb on - strand at 126.878 kb on - strand at 127.223 kb on + strand, within Ac3H11_3218 at 127.223 kb on + strand, within Ac3H11_3218 at 127.224 kb on - strand, within Ac3H11_3218 at 127.502 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 124,550 + Ac3H11_3216 0.86 -2.2 124,550 + Ac3H11_3216 0.86 +0.1 124,551 - Ac3H11_3216 0.86 +0.1 124,551 - Ac3H11_3216 0.86 +0.5 124,570 - Ac3H11_3216 0.87 -0.7 124,705 + +0.3 124,706 - -0.3 124,706 - -0.1 124,706 - +1.2 124,709 + +0.2 124,709 + -0.8 124,709 + +0.9 124,709 + +0.0 124,709 + -1.3 124,709 + -0.6 124,709 + +0.1 124,709 + -0.4 124,709 + +0.7 124,709 + -0.2 124,709 + -0.5 124,709 + -1.2 124,709 + -0.2 124,709 + -0.3 124,709 + -0.5 124,709 + +1.2 124,709 + -0.2 124,709 + -0.2 124,709 + +0.7 124,709 + +0.6 124,709 + -1.4 124,710 - -0.2 124,710 - -0.2 124,710 - -0.2 124,710 - -1.2 124,710 - +0.8 124,710 - +0.2 124,710 - +0.3 124,710 - +0.5 124,710 - -0.1 124,710 - -0.4 124,710 - +0.8 124,710 - -0.4 124,710 - -0.3 124,710 - +0.5 124,710 - -1.5 124,710 - +0.3 124,710 - +0.7 124,788 + +1.1 124,790 + -0.4 124,790 + +0.8 124,790 + -0.9 124,790 + +0.3 124,790 + +0.7 124,790 + +0.3 124,791 - -0.3 124,791 - +0.3 124,791 - -0.5 124,846 - -2.0 124,846 - -0.1 124,846 - +0.0 124,846 - -0.8 124,987 + -0.5 124,987 + +0.8 124,987 + +0.3 124,987 + +0.1 124,991 + -0.2 124,991 + -0.8 124,991 + -0.7 124,991 + -0.1 124,991 + -0.1 124,991 + -0.2 124,991 + -1.4 125,091 - -1.3 125,096 + +0.2 125,121 + -0.2 125,121 + -1.6 125,122 - +0.8 125,122 - -0.7 125,142 + +0.3 125,143 - +1.4 125,173 + -0.2 125,174 - +0.7 125,174 - +0.1 125,174 - -0.8 125,302 + +0.9 125,302 + -0.9 125,369 - +0.3 125,373 - -0.3 125,373 - -0.1 125,415 + -0.0 125,448 + -0.1 125,449 - +0.3 125,449 - +1.5 125,486 + -0.2 125,537 + -2.0 125,537 + +0.3 125,537 + -0.9 125,537 + -0.6 125,537 + +0.2 125,537 + -0.5 125,537 + -0.1 125,537 + +0.0 125,537 + -0.0 125,537 + -1.3 125,538 - +0.3 125,556 - +1.1 125,556 - +1.0 125,687 + Ac3H11_3217 0.17 -0.3 125,687 + Ac3H11_3217 0.17 +0.1 125,687 + Ac3H11_3217 0.17 +0.7 125,687 + Ac3H11_3217 0.17 +0.3 125,687 + Ac3H11_3217 0.17 -0.2 125,687 + Ac3H11_3217 0.17 -2.2 125,687 + Ac3H11_3217 0.17 +0.9 125,688 - Ac3H11_3217 0.17 -0.5 125,688 - Ac3H11_3217 0.17 -0.4 125,688 - Ac3H11_3217 0.17 +0.4 125,688 - Ac3H11_3217 0.17 -0.1 125,688 - Ac3H11_3217 0.17 +0.6 125,688 - Ac3H11_3217 0.17 -1.1 125,699 + Ac3H11_3217 0.18 -0.3 125,699 + Ac3H11_3217 0.18 -1.0 125,699 + Ac3H11_3217 0.18 -0.2 125,699 + Ac3H11_3217 0.18 -0.3 125,700 - Ac3H11_3217 0.19 +0.3 125,700 - Ac3H11_3217 0.19 -1.4 125,700 - Ac3H11_3217 0.19 -0.1 125,705 + Ac3H11_3217 0.19 -0.3 125,705 + Ac3H11_3217 0.19 -0.1 125,706 - Ac3H11_3217 0.19 -1.2 125,748 - Ac3H11_3217 0.23 +1.0 125,748 - Ac3H11_3217 0.23 +0.0 125,748 - Ac3H11_3217 0.23 +3.5 125,810 + Ac3H11_3217 0.28 +0.6 125,810 + Ac3H11_3217 0.28 +1.1 125,810 + Ac3H11_3217 0.28 +0.1 125,810 + Ac3H11_3217 0.28 -0.1 125,810 + Ac3H11_3217 0.28 -0.8 125,810 + Ac3H11_3217 0.28 -0.4 125,810 + Ac3H11_3217 0.28 -0.4 125,810 + Ac3H11_3217 0.28 +0.3 125,810 + Ac3H11_3217 0.28 -0.4 125,810 + Ac3H11_3217 0.28 -0.2 125,810 + Ac3H11_3217 0.28 +0.5 125,810 + Ac3H11_3217 0.28 -0.1 125,811 - Ac3H11_3217 0.28 -0.5 125,811 - Ac3H11_3217 0.28 -0.1 125,811 - Ac3H11_3217 0.28 +0.6 125,811 - Ac3H11_3217 0.28 +0.9 125,811 - Ac3H11_3217 0.28 -0.7 125,811 - Ac3H11_3217 0.28 -0.6 125,811 - Ac3H11_3217 0.28 +0.1 125,811 - Ac3H11_3217 0.28 +0.0 125,811 - Ac3H11_3217 0.28 +0.3 125,811 - Ac3H11_3217 0.28 +0.0 125,811 - Ac3H11_3217 0.28 +0.1 126,122 + Ac3H11_3217 0.55 +0.7 126,122 + Ac3H11_3217 0.55 +1.7 126,275 + Ac3H11_3217 0.68 -0.4 126,275 + Ac3H11_3217 0.68 -0.5 126,275 + Ac3H11_3217 0.68 +1.4 126,275 + Ac3H11_3217 0.68 -0.0 126,275 + Ac3H11_3217 0.68 +1.1 126,276 - Ac3H11_3217 0.68 -1.8 126,430 + Ac3H11_3217 0.81 +1.3 126,431 - Ac3H11_3217 0.81 -0.1 126,431 - Ac3H11_3217 0.81 -0.3 126,437 + Ac3H11_3217 0.82 +0.3 126,437 + Ac3H11_3217 0.82 -0.3 126,438 - Ac3H11_3217 0.82 -1.0 126,659 + -2.4 126,660 - -0.7 126,660 - -0.3 126,660 - +0.1 126,685 + +0.8 126,685 + +0.8 126,685 + -0.9 126,685 + +0.5 126,685 + +0.8 126,685 + +0.3 126,685 + -1.3 126,685 + -1.1 126,685 + -0.5 126,685 + -2.2 126,685 + -0.1 126,685 + -0.8 126,685 + -0.3 126,685 + -0.0 126,685 + -1.2 126,685 + +0.2 126,686 - -0.2 126,686 - +0.1 126,686 - +1.2 126,686 - -0.0 126,686 - -0.1 126,686 - -0.4 126,686 - +0.3 126,686 - -0.6 126,686 - -2.7 126,686 - -0.2 126,686 - -0.9 126,686 - +0.9 126,686 - +2.0 126,686 - -0.3 126,686 - -0.7 126,686 - -0.7 126,686 - +0.5 126,686 - -0.7 126,687 + +0.2 126,687 + -1.2 126,688 - -0.9 126,688 - +0.3 126,688 - -0.4 126,688 - -0.6 126,688 - -0.1 126,718 - +0.2 126,739 + +0.1 126,739 + -0.6 126,739 + -1.1 126,740 - +0.1 126,742 + +0.9 126,743 - +0.1 126,743 - +0.0 126,877 + +1.0 126,878 - +0.2 126,878 - -0.4 127,223 + Ac3H11_3218 0.56 +0.2 127,223 + Ac3H11_3218 0.56 +1.7 127,224 - Ac3H11_3218 0.56 +2.0 127,502 + +0.2
Or see this region's nucleotide sequence