Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_250

Experiment: 2-Furfuraldehyde 0.06 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_248 and Ac3H11_249 overlap by 13 nucleotidesAc3H11_249 and Ac3H11_250 overlap by 42 nucleotides Ac3H11_248 - Ferrichrome-iron receptor, at 64,823 to 66,955 _248 Ac3H11_249 - hypothetical protein, at 66,943 to 67,128 _249 Ac3H11_250 - Ferrichrome-iron receptor, at 67,087 to 69,255 _250 Position (kb) 67 68 69 70Strain fitness (log2 ratio) -2 -1 0 1 2at 66.087 kb on + strand, within Ac3H11_248at 66.200 kb on + strand, within Ac3H11_248at 66.200 kb on + strand, within Ac3H11_248at 66.201 kb on - strand, within Ac3H11_248at 66.201 kb on - strand, within Ac3H11_248at 66.674 kb on + strand, within Ac3H11_248at 66.774 kb on - strandat 66.861 kb on - strandat 66.864 kb on - strandat 66.864 kb on - strandat 67.010 kb on + strand, within Ac3H11_249at 67.011 kb on - strand, within Ac3H11_249at 67.423 kb on + strand, within Ac3H11_250at 67.424 kb on - strand, within Ac3H11_250at 67.424 kb on - strand, within Ac3H11_250at 67.424 kb on - strand, within Ac3H11_250at 67.477 kb on + strand, within Ac3H11_250at 67.478 kb on - strand, within Ac3H11_250at 67.534 kb on + strand, within Ac3H11_250at 67.582 kb on + strand, within Ac3H11_250at 67.582 kb on + strand, within Ac3H11_250at 67.583 kb on - strand, within Ac3H11_250at 67.936 kb on + strand, within Ac3H11_250at 67.937 kb on - strand, within Ac3H11_250at 67.987 kb on + strand, within Ac3H11_250at 67.987 kb on + strand, within Ac3H11_250at 68.089 kb on + strand, within Ac3H11_250at 68.101 kb on + strand, within Ac3H11_250at 68.101 kb on + strand, within Ac3H11_250at 68.102 kb on - strand, within Ac3H11_250at 68.102 kb on - strand, within Ac3H11_250at 68.102 kb on - strand, within Ac3H11_250at 68.102 kb on - strand, within Ac3H11_250at 68.102 kb on - strand, within Ac3H11_250at 68.350 kb on + strand, within Ac3H11_250at 68.350 kb on + strand, within Ac3H11_250at 68.350 kb on + strand, within Ac3H11_250at 68.350 kb on + strand, within Ac3H11_250at 68.350 kb on + strand, within Ac3H11_250at 68.351 kb on - strand, within Ac3H11_250at 68.351 kb on - strand, within Ac3H11_250at 68.351 kb on - strand, within Ac3H11_250at 68.363 kb on - strand, within Ac3H11_250at 68.414 kb on + strand, within Ac3H11_250at 68.414 kb on + strand, within Ac3H11_250at 68.414 kb on + strand, within Ac3H11_250at 68.415 kb on - strand, within Ac3H11_250at 68.415 kb on - strand, within Ac3H11_250at 68.438 kb on - strand, within Ac3H11_250at 68.576 kb on - strand, within Ac3H11_250at 68.576 kb on - strand, within Ac3H11_250at 68.602 kb on + strand, within Ac3H11_250at 68.612 kb on - strand, within Ac3H11_250at 68.746 kb on + strand, within Ac3H11_250at 68.747 kb on - strand, within Ac3H11_250at 68.887 kb on + strand, within Ac3H11_250at 68.888 kb on - strand, within Ac3H11_250at 69.043 kb on - strandat 69.043 kb on - strandat 69.209 kb on - strandat 69.209 kb on - strandat 69.226 kb on + strandat 69.226 kb on + strandat 69.227 kb on - strandat 69.227 kb on - strandat 69.227 kb on - strandat 69.227 kb on - strandat 69.227 kb on - strandat 69.245 kb on - strandat 69.554 kb on + strandat 69.634 kb on + strandat 69.634 kb on + strandat 69.634 kb on + strandat 69.634 kb on + strandat 69.634 kb on + strandat 69.635 kb on - strandat 69.635 kb on - strandat 69.635 kb on - strandat 69.686 kb on + strandat 69.686 kb on + strandat 69.751 kb on + strandat 69.751 kb on + strandat 69.751 kb on + strandat 69.751 kb on + strandat 69.751 kb on + strandat 69.751 kb on + strandat 69.751 kb on + strandat 69.751 kb on + strandat 69.751 kb on + strandat 69.751 kb on + strandat 69.752 kb on - strandat 69.752 kb on - strandat 69.752 kb on - strandat 69.881 kb on + strandat 69.881 kb on + strandat 69.881 kb on + strandat 69.881 kb on + strandat 69.881 kb on + strandat 69.881 kb on + strandat 69.882 kb on - strandat 69.882 kb on - strandat 69.882 kb on - strandat 69.882 kb on - strandat 69.882 kb on - strandat 69.882 kb on - strandat 69.983 kb on + strandat 69.984 kb on - strandat 69.984 kb on - strandat 69.984 kb on - strandat 70.140 kb on + strandat 70.140 kb on + strandat 70.167 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol%
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66,087 + Ac3H11_248 0.59 -0.8
66,200 + Ac3H11_248 0.65 -0.4
66,200 + Ac3H11_248 0.65 -0.7
66,201 - Ac3H11_248 0.65 -0.9
66,201 - Ac3H11_248 0.65 +0.0
66,674 + Ac3H11_248 0.87 -0.8
66,774 - +0.2
66,861 - +1.2
66,864 - +0.2
66,864 - -0.2
67,010 + Ac3H11_249 0.36 -1.0
67,011 - Ac3H11_249 0.37 -0.5
67,423 + Ac3H11_250 0.15 +0.5
67,424 - Ac3H11_250 0.16 +0.0
67,424 - Ac3H11_250 0.16 -0.6
67,424 - Ac3H11_250 0.16 +0.3
67,477 + Ac3H11_250 0.18 -0.2
67,478 - Ac3H11_250 0.18 +0.2
67,534 + Ac3H11_250 0.21 +0.4
67,582 + Ac3H11_250 0.23 -1.2
67,582 + Ac3H11_250 0.23 -0.1
67,583 - Ac3H11_250 0.23 +0.1
67,936 + Ac3H11_250 0.39 +1.3
67,937 - Ac3H11_250 0.39 -0.1
67,987 + Ac3H11_250 0.41 -0.4
67,987 + Ac3H11_250 0.41 +1.6
68,089 + Ac3H11_250 0.46 +0.4
68,101 + Ac3H11_250 0.47 -0.5
68,101 + Ac3H11_250 0.47 -0.7
68,102 - Ac3H11_250 0.47 +0.2
68,102 - Ac3H11_250 0.47 -0.2
68,102 - Ac3H11_250 0.47 +0.6
68,102 - Ac3H11_250 0.47 -0.2
68,102 - Ac3H11_250 0.47 -0.3
68,350 + Ac3H11_250 0.58 -0.4
68,350 + Ac3H11_250 0.58 -0.5
68,350 + Ac3H11_250 0.58 +0.8
68,350 + Ac3H11_250 0.58 +0.4
68,350 + Ac3H11_250 0.58 -0.8
68,351 - Ac3H11_250 0.58 +0.1
68,351 - Ac3H11_250 0.58 +0.5
68,351 - Ac3H11_250 0.58 +0.6
68,363 - Ac3H11_250 0.59 -0.6
68,414 + Ac3H11_250 0.61 -0.4
68,414 + Ac3H11_250 0.61 +0.6
68,414 + Ac3H11_250 0.61 -0.7
68,415 - Ac3H11_250 0.61 -0.4
68,415 - Ac3H11_250 0.61 +1.0
68,438 - Ac3H11_250 0.62 +0.3
68,576 - Ac3H11_250 0.69 +0.5
68,576 - Ac3H11_250 0.69 -0.5
68,602 + Ac3H11_250 0.70 -0.8
68,612 - Ac3H11_250 0.70 +0.9
68,746 + Ac3H11_250 0.76 -0.2
68,747 - Ac3H11_250 0.77 +0.1
68,887 + Ac3H11_250 0.83 -1.1
68,888 - Ac3H11_250 0.83 -0.2
69,043 - +0.7
69,043 - -0.7
69,209 - +0.3
69,209 - +0.7
69,226 + -0.1
69,226 + -0.2
69,227 - +0.3
69,227 - +0.4
69,227 - +0.5
69,227 - +0.9
69,227 - +0.1
69,245 - +0.5
69,554 + +0.5
69,634 + +0.3
69,634 + -0.0
69,634 + +0.4
69,634 + -0.2
69,634 + -0.7
69,635 - -0.3
69,635 - +0.3
69,635 - -0.3
69,686 + -1.9
69,686 + -0.6
69,751 + -0.2
69,751 + +0.2
69,751 + -0.6
69,751 + +0.1
69,751 + -0.1
69,751 + +0.9
69,751 + -1.6
69,751 + -0.1
69,751 + -0.1
69,751 + -0.2
69,752 - +0.2
69,752 - -0.2
69,752 - +0.1
69,881 + +0.0
69,881 + -0.4
69,881 + +0.6
69,881 + +0.2
69,881 + -1.4
69,881 + -0.1
69,882 - -0.2
69,882 - +0.5
69,882 - +0.1
69,882 - +0.2
69,882 - +0.2
69,882 - +2.1
69,983 + +0.1
69,984 - +0.4
69,984 - -0.7
69,984 - +0.1
70,140 + +0.1
70,140 + +0.3
70,167 + +0.2

Or see this region's nucleotide sequence