Experiment: 2-Furfuraldehyde 0.06 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2167 and Ac3H11_2168 are separated by 9 nucleotides Ac3H11_2168 and Ac3H11_2169 are separated by 255 nucleotides Ac3H11_2169 and Ac3H11_2170 overlap by 1 nucleotides
Ac3H11_2167 - NADH dehydrogenase (EC 1.6.99.3), at 395,924 to 397,318
_2167
Ac3H11_2168 - Probable lipoprotein, at 397,328 to 397,993
_2168
Ac3H11_2169 - ABC-type transport system involved in resistance to organic solvents, periplasmic component, at 398,249 to 399,211
_2169
Ac3H11_2170 - Methionine ABC transporter ATP-binding protein, at 399,211 to 400,080
_2170
Position (kb) 398
399
400 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 397.329 kb on + strand at 397.330 kb on - strand at 397.330 kb on - strand at 397.884 kb on + strand, within Ac3H11_2168 at 397.993 kb on + strand at 398.301 kb on + strand at 398.914 kb on - strand, within Ac3H11_2169 at 399.042 kb on + strand, within Ac3H11_2169 at 399.042 kb on + strand, within Ac3H11_2169 at 399.043 kb on - strand, within Ac3H11_2169 at 399.099 kb on + strand, within Ac3H11_2169 at 399.100 kb on - strand, within Ac3H11_2169 at 399.108 kb on + strand, within Ac3H11_2169 at 399.109 kb on - strand, within Ac3H11_2169 at 399.370 kb on - strand, within Ac3H11_2170 at 400.059 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol% remove 397,329 + +0.6 397,330 - -0.4 397,330 - +1.1 397,884 + Ac3H11_2168 0.83 -0.6 397,993 + +0.8 398,301 + -0.8 398,914 - Ac3H11_2169 0.69 +1.0 399,042 + Ac3H11_2169 0.82 -0.9 399,042 + Ac3H11_2169 0.82 -0.4 399,043 - Ac3H11_2169 0.82 -1.9 399,099 + Ac3H11_2169 0.88 -0.9 399,100 - Ac3H11_2169 0.88 -0.1 399,108 + Ac3H11_2169 0.89 +0.2 399,109 - Ac3H11_2169 0.89 -1.8 399,370 - Ac3H11_2170 0.18 -2.9 400,059 + -1.5
Or see this region's nucleotide sequence