Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_1506

Experiment: 2-Furfuraldehyde 0.06 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_1505 and Ac3H11_1506 are separated by 22 nucleotidesAc3H11_1506 and Ac3H11_1507 are separated by 35 nucleotides Ac3H11_1505 - Threonine synthase (EC 4.2.3.1), at 83,503 to 84,948 _1505 Ac3H11_1506 - hypothetical protein, at 84,971 to 85,285 _1506 Ac3H11_1507 - Homoserine dehydrogenase (EC 1.1.1.3), at 85,321 to 86,655 _1507 Position (kb) 84 85 86Strain fitness (log2 ratio) -2 -1 0 1 2at 84.988 kb on - strandat 84.988 kb on - strandat 85.075 kb on - strand, within Ac3H11_1506at 85.075 kb on - strand, within Ac3H11_1506at 85.075 kb on - strand, within Ac3H11_1506at 85.075 kb on - strand, within Ac3H11_1506at 85.075 kb on - strand, within Ac3H11_1506at 85.105 kb on - strand, within Ac3H11_1506at 85.105 kb on - strand, within Ac3H11_1506at 85.581 kb on - strand, within Ac3H11_1507at 85.581 kb on - strand, within Ac3H11_1507at 85.581 kb on - strand, within Ac3H11_1507at 85.581 kb on - strand, within Ac3H11_1507at 85.584 kb on - strand, within Ac3H11_1507at 85.584 kb on - strand, within Ac3H11_1507at 85.584 kb on - strand, within Ac3H11_1507at 85.584 kb on - strand, within Ac3H11_1507at 85.584 kb on - strand, within Ac3H11_1507at 85.584 kb on - strand, within Ac3H11_1507at 85.584 kb on - strand, within Ac3H11_1507at 85.584 kb on - strand, within Ac3H11_1507at 85.770 kb on - strand, within Ac3H11_1507at 85.770 kb on - strand, within Ac3H11_1507at 85.770 kb on - strand, within Ac3H11_1507at 85.770 kb on - strand, within Ac3H11_1507at 85.770 kb on - strand, within Ac3H11_1507at 85.944 kb on - strand, within Ac3H11_1507at 85.944 kb on - strand, within Ac3H11_1507at 85.986 kb on - strand, within Ac3H11_1507at 85.986 kb on - strand, within Ac3H11_1507at 85.986 kb on - strand, within Ac3H11_1507at 85.986 kb on - strand, within Ac3H11_1507

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.06 vol%
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84,988 - -1.5
84,988 - -0.7
85,075 - Ac3H11_1506 0.33 -1.0
85,075 - Ac3H11_1506 0.33 +0.7
85,075 - Ac3H11_1506 0.33 -0.3
85,075 - Ac3H11_1506 0.33 +0.1
85,075 - Ac3H11_1506 0.33 +0.1
85,105 - Ac3H11_1506 0.43 -0.7
85,105 - Ac3H11_1506 0.43 +0.6
85,581 - Ac3H11_1507 0.19 -1.0
85,581 - Ac3H11_1507 0.19 +2.1
85,581 - Ac3H11_1507 0.19 -0.1
85,581 - Ac3H11_1507 0.19 -1.4
85,584 - Ac3H11_1507 0.20 -1.2
85,584 - Ac3H11_1507 0.20 +0.3
85,584 - Ac3H11_1507 0.20 -0.1
85,584 - Ac3H11_1507 0.20 +0.4
85,584 - Ac3H11_1507 0.20 -1.0
85,584 - Ac3H11_1507 0.20 -1.8
85,584 - Ac3H11_1507 0.20 -1.8
85,584 - Ac3H11_1507 0.20 -1.1
85,770 - Ac3H11_1507 0.34 -1.3
85,770 - Ac3H11_1507 0.34 -0.7
85,770 - Ac3H11_1507 0.34 -0.2
85,770 - Ac3H11_1507 0.34 -1.4
85,770 - Ac3H11_1507 0.34 -0.6
85,944 - Ac3H11_1507 0.47 -0.9
85,944 - Ac3H11_1507 0.47 -0.1
85,986 - Ac3H11_1507 0.50 -0.9
85,986 - Ac3H11_1507 0.50 +0.8
85,986 - Ac3H11_1507 0.50 -1.3
85,986 - Ac3H11_1507 0.50 +1.1

Or see this region's nucleotide sequence