Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23965 and AZOBR_RS23970 are separated by 10 nucleotides AZOBR_RS23970 and AZOBR_RS23975 are separated by 86 nucleotides AZOBR_RS23975 and AZOBR_RS23980 overlap by 4 nucleotides AZOBR_RS23980 and AZOBR_RS23985 are separated by 171 nucleotides
AZOBR_RS23965: AZOBR_RS23965 - potassium-transporting ATPase subunit B, at 406,551 to 408,680
_RS23965
AZOBR_RS23970: AZOBR_RS23970 - ATPase, at 408,691 to 409,299
_RS23970
AZOBR_RS23975: AZOBR_RS23975 - histidine kinase, at 409,386 to 412,145
_RS23975
AZOBR_RS23980: AZOBR_RS23980 - Fis family transcriptional regulator, at 412,142 to 412,840
_RS23980
AZOBR_RS23985: AZOBR_RS23985 - membrane protein, at 413,012 to 413,665
_RS23985
Position (kb) 409
410
411
412
413 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 408.390 kb on + strand, within AZOBR_RS23965 at 408.391 kb on - strand, within AZOBR_RS23965 at 408.391 kb on - strand, within AZOBR_RS23965 at 408.427 kb on - strand, within AZOBR_RS23965 at 408.427 kb on - strand, within AZOBR_RS23965 at 408.600 kb on + strand at 408.601 kb on - strand at 408.601 kb on - strand at 408.883 kb on + strand, within AZOBR_RS23970 at 408.884 kb on - strand, within AZOBR_RS23970 at 408.955 kb on + strand, within AZOBR_RS23970 at 409.297 kb on + strand at 409.512 kb on + strand at 409.650 kb on + strand at 409.650 kb on + strand at 409.651 kb on - strand at 409.651 kb on - strand at 409.770 kb on + strand, within AZOBR_RS23975 at 409.770 kb on + strand, within AZOBR_RS23975 at 409.771 kb on - strand, within AZOBR_RS23975 at 409.812 kb on + strand, within AZOBR_RS23975 at 409.813 kb on - strand, within AZOBR_RS23975 at 409.986 kb on + strand, within AZOBR_RS23975 at 409.986 kb on + strand, within AZOBR_RS23975 at 409.987 kb on - strand, within AZOBR_RS23975 at 410.022 kb on + strand, within AZOBR_RS23975 at 410.022 kb on + strand, within AZOBR_RS23975 at 410.022 kb on + strand, within AZOBR_RS23975 at 410.022 kb on + strand, within AZOBR_RS23975 at 410.022 kb on + strand, within AZOBR_RS23975 at 410.023 kb on - strand, within AZOBR_RS23975 at 410.023 kb on - strand, within AZOBR_RS23975 at 410.023 kb on - strand, within AZOBR_RS23975 at 410.023 kb on - strand, within AZOBR_RS23975 at 410.388 kb on + strand, within AZOBR_RS23975 at 410.799 kb on + strand, within AZOBR_RS23975 at 410.800 kb on - strand, within AZOBR_RS23975 at 410.800 kb on - strand, within AZOBR_RS23975 at 411.925 kb on - strand at 411.925 kb on - strand at 412.236 kb on - strand, within AZOBR_RS23980 at 412.454 kb on + strand, within AZOBR_RS23980 at 412.454 kb on + strand, within AZOBR_RS23980 at 412.454 kb on + strand, within AZOBR_RS23980 at 412.454 kb on + strand, within AZOBR_RS23980 at 412.455 kb on - strand, within AZOBR_RS23980 at 412.455 kb on - strand, within AZOBR_RS23980 at 412.455 kb on - strand, within AZOBR_RS23980 at 412.455 kb on - strand, within AZOBR_RS23980 at 412.455 kb on - strand, within AZOBR_RS23980 at 412.632 kb on - strand, within AZOBR_RS23980 at 412.632 kb on - strand, within AZOBR_RS23980 at 412.632 kb on - strand, within AZOBR_RS23980 at 412.728 kb on - strand, within AZOBR_RS23980 at 412.728 kb on - strand, within AZOBR_RS23980 at 412.739 kb on + strand, within AZOBR_RS23980 at 412.739 kb on + strand, within AZOBR_RS23980 at 412.740 kb on - strand, within AZOBR_RS23980 at 412.740 kb on - strand, within AZOBR_RS23980 at 412.740 kb on - strand, within AZOBR_RS23980 at 412.740 kb on - strand, within AZOBR_RS23980 at 412.740 kb on - strand, within AZOBR_RS23980 at 413.009 kb on + strand at 413.012 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 408,390 + AZOBR_RS23965 0.86 +0.6 408,391 - AZOBR_RS23965 0.86 +0.1 408,391 - AZOBR_RS23965 0.86 +0.1 408,427 - AZOBR_RS23965 0.88 -1.4 408,427 - AZOBR_RS23965 0.88 +0.7 408,600 + -0.1 408,601 - -0.2 408,601 - +0.8 408,883 + AZOBR_RS23970 0.32 +0.3 408,884 - AZOBR_RS23970 0.32 -0.4 408,955 + AZOBR_RS23970 0.43 -0.5 409,297 + -0.4 409,512 + +0.1 409,650 + +0.9 409,650 + +0.1 409,651 - -1.0 409,651 - +0.7 409,770 + AZOBR_RS23975 0.14 -0.3 409,770 + AZOBR_RS23975 0.14 +0.0 409,771 - AZOBR_RS23975 0.14 +1.1 409,812 + AZOBR_RS23975 0.15 -0.5 409,813 - AZOBR_RS23975 0.15 +3.6 409,986 + AZOBR_RS23975 0.22 -0.5 409,986 + AZOBR_RS23975 0.22 +0.3 409,987 - AZOBR_RS23975 0.22 +0.4 410,022 + AZOBR_RS23975 0.23 -0.1 410,022 + AZOBR_RS23975 0.23 -0.3 410,022 + AZOBR_RS23975 0.23 -1.2 410,022 + AZOBR_RS23975 0.23 -0.1 410,022 + AZOBR_RS23975 0.23 -0.0 410,023 - AZOBR_RS23975 0.23 -0.6 410,023 - AZOBR_RS23975 0.23 -0.4 410,023 - AZOBR_RS23975 0.23 -0.1 410,023 - AZOBR_RS23975 0.23 -0.0 410,388 + AZOBR_RS23975 0.36 +0.2 410,799 + AZOBR_RS23975 0.51 -0.3 410,800 - AZOBR_RS23975 0.51 +0.4 410,800 - AZOBR_RS23975 0.51 -0.7 411,925 - +0.2 411,925 - -0.1 412,236 - AZOBR_RS23980 0.13 +0.1 412,454 + AZOBR_RS23980 0.45 +0.2 412,454 + AZOBR_RS23980 0.45 +0.4 412,454 + AZOBR_RS23980 0.45 +0.8 412,454 + AZOBR_RS23980 0.45 -0.1 412,455 - AZOBR_RS23980 0.45 +0.5 412,455 - AZOBR_RS23980 0.45 -0.4 412,455 - AZOBR_RS23980 0.45 -0.4 412,455 - AZOBR_RS23980 0.45 +0.2 412,455 - AZOBR_RS23980 0.45 -1.4 412,632 - AZOBR_RS23980 0.70 -0.6 412,632 - AZOBR_RS23980 0.70 +0.1 412,632 - AZOBR_RS23980 0.70 +0.0 412,728 - AZOBR_RS23980 0.84 -0.5 412,728 - AZOBR_RS23980 0.84 -0.7 412,739 + AZOBR_RS23980 0.85 -2.5 412,739 + AZOBR_RS23980 0.85 +0.4 412,740 - AZOBR_RS23980 0.86 -0.1 412,740 - AZOBR_RS23980 0.86 +0.5 412,740 - AZOBR_RS23980 0.86 +0.3 412,740 - AZOBR_RS23980 0.86 +0.1 412,740 - AZOBR_RS23980 0.86 -1.3 413,009 + +0.5 413,012 - -2.1
Or see this region's nucleotide sequence