Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS00640 and AZOBR_RS00645 are separated by 20 nucleotides AZOBR_RS00645 and AZOBR_RS00650 overlap by 4 nucleotides AZOBR_RS00650 and AZOBR_RS00655 overlap by 8 nucleotides
AZOBR_RS00640: AZOBR_RS00640 - pyrophosphorylase, at 128,739 to 129,566
_RS00640
AZOBR_RS00645: AZOBR_RS00645 - magnesium transporter, at 129,587 to 130,576
_RS00645
AZOBR_RS00650: AZOBR_RS00650 - 5 10-methylene-tetrahydrofolate dehydrogenase, at 130,573 to 131,481
_RS00650
AZOBR_RS00655: AZOBR_RS00655 - hypothetical protein, at 131,474 to 131,833
_RS00655
Position (kb) 129
130
131 Strain fitness (log2 ratio) -1
0
1 at 128.648 kb on - strand at 128.648 kb on - strand at 128.650 kb on - strand at 128.828 kb on - strand, within AZOBR_RS00640 at 129.588 kb on + strand at 129.588 kb on + strand at 130.356 kb on + strand, within AZOBR_RS00645 at 130.356 kb on + strand, within AZOBR_RS00645 at 130.356 kb on + strand, within AZOBR_RS00645 at 130.357 kb on - strand, within AZOBR_RS00645 at 130.357 kb on - strand, within AZOBR_RS00645 at 130.378 kb on - strand, within AZOBR_RS00645
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 128,648 - +0.4 128,648 - -0.0 128,650 - -0.1 128,828 - AZOBR_RS00640 0.11 +1.7 129,588 + +1.6 129,588 + +0.1 130,356 + AZOBR_RS00645 0.78 -1.7 130,356 + AZOBR_RS00645 0.78 +1.1 130,356 + AZOBR_RS00645 0.78 -0.3 130,357 - AZOBR_RS00645 0.78 -0.9 130,357 - AZOBR_RS00645 0.78 -0.7 130,378 - AZOBR_RS00645 0.80 -0.5
Or see this region's nucleotide sequence