Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS18280 and ABZR86_RS18285 are separated by 14 nucleotides ABZR86_RS18285 and ABZR86_RS18290 are separated by 1 nucleotides
ABZR86_RS18280: ABZR86_RS18280 - efflux RND transporter periplasmic adaptor subunit, at 72,719 to 73,909
_RS18280
ABZR86_RS18285: ABZR86_RS18285 - efflux RND transporter permease subunit, at 73,924 to 77,067
_RS18285
ABZR86_RS18290: ABZR86_RS18290 - AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor, at 77,069 to 78,562
_RS18290
Position (kb) 73
74
75
76
77
78 Strain fitness (log2 ratio) -1
0
1 at 72.996 kb on - strand, within ABZR86_RS18280 at 73.016 kb on + strand, within ABZR86_RS18280 at 73.016 kb on + strand, within ABZR86_RS18280 at 73.016 kb on + strand, within ABZR86_RS18280 at 73.016 kb on + strand, within ABZR86_RS18280 at 73.016 kb on + strand, within ABZR86_RS18280 at 73.017 kb on - strand, within ABZR86_RS18280 at 73.028 kb on + strand, within ABZR86_RS18280 at 73.029 kb on - strand, within ABZR86_RS18280 at 73.101 kb on - strand, within ABZR86_RS18280 at 73.352 kb on + strand, within ABZR86_RS18280 at 73.352 kb on + strand, within ABZR86_RS18280 at 73.352 kb on + strand, within ABZR86_RS18280 at 73.353 kb on - strand, within ABZR86_RS18280 at 73.478 kb on + strand, within ABZR86_RS18280 at 73.592 kb on + strand, within ABZR86_RS18280 at 73.592 kb on + strand, within ABZR86_RS18280 at 73.592 kb on + strand, within ABZR86_RS18280 at 73.592 kb on + strand, within ABZR86_RS18280 at 73.593 kb on - strand, within ABZR86_RS18280 at 73.593 kb on - strand, within ABZR86_RS18280 at 73.593 kb on - strand, within ABZR86_RS18280 at 73.593 kb on - strand, within ABZR86_RS18280 at 73.907 kb on + strand at 73.907 kb on + strand at 73.908 kb on - strand at 73.908 kb on - strand at 74.152 kb on + strand at 74.152 kb on + strand at 74.152 kb on + strand at 74.152 kb on + strand at 74.153 kb on - strand at 74.467 kb on + strand, within ABZR86_RS18285 at 74.531 kb on + strand, within ABZR86_RS18285 at 74.532 kb on - strand, within ABZR86_RS18285 at 74.532 kb on - strand, within ABZR86_RS18285 at 74.532 kb on - strand, within ABZR86_RS18285 at 74.532 kb on - strand, within ABZR86_RS18285 at 74.532 kb on - strand, within ABZR86_RS18285 at 74.532 kb on - strand, within ABZR86_RS18285 at 74.532 kb on - strand, within ABZR86_RS18285 at 74.827 kb on - strand, within ABZR86_RS18285 at 74.990 kb on - strand, within ABZR86_RS18285 at 75.322 kb on + strand, within ABZR86_RS18285 at 75.322 kb on + strand, within ABZR86_RS18285 at 75.323 kb on - strand, within ABZR86_RS18285 at 75.541 kb on + strand, within ABZR86_RS18285 at 75.542 kb on - strand, within ABZR86_RS18285 at 75.542 kb on - strand, within ABZR86_RS18285 at 75.553 kb on + strand, within ABZR86_RS18285 at 75.553 kb on + strand, within ABZR86_RS18285 at 75.553 kb on + strand, within ABZR86_RS18285 at 76.189 kb on + strand, within ABZR86_RS18285 at 76.190 kb on - strand, within ABZR86_RS18285 at 76.190 kb on - strand, within ABZR86_RS18285 at 76.190 kb on - strand, within ABZR86_RS18285 at 76.285 kb on + strand, within ABZR86_RS18285 at 76.286 kb on - strand, within ABZR86_RS18285 at 76.549 kb on + strand, within ABZR86_RS18285 at 76.549 kb on + strand, within ABZR86_RS18285 at 76.549 kb on + strand, within ABZR86_RS18285 at 76.550 kb on - strand, within ABZR86_RS18285 at 76.551 kb on + strand, within ABZR86_RS18285 at 76.551 kb on + strand, within ABZR86_RS18285 at 76.551 kb on + strand, within ABZR86_RS18285 at 76.552 kb on - strand, within ABZR86_RS18285 at 76.552 kb on - strand, within ABZR86_RS18285 at 76.552 kb on - strand, within ABZR86_RS18285 at 76.552 kb on - strand, within ABZR86_RS18285 at 76.697 kb on - strand, within ABZR86_RS18285 at 77.069 kb on - strand at 77.069 kb on - strand at 77.069 kb on - strand at 77.069 kb on - strand at 77.069 kb on - strand at 77.145 kb on - strand at 77.465 kb on + strand, within ABZR86_RS18290 at 77.584 kb on + strand, within ABZR86_RS18290 at 77.615 kb on + strand, within ABZR86_RS18290 at 77.616 kb on - strand, within ABZR86_RS18290 at 77.682 kb on - strand, within ABZR86_RS18290 at 77.688 kb on - strand, within ABZR86_RS18290 at 77.790 kb on - strand, within ABZR86_RS18290 at 77.791 kb on + strand, within ABZR86_RS18290 at 77.792 kb on - strand, within ABZR86_RS18290
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 72,996 - ABZR86_RS18280 0.23 -0.1 73,016 + ABZR86_RS18280 0.25 +0.4 73,016 + ABZR86_RS18280 0.25 +0.2 73,016 + ABZR86_RS18280 0.25 -0.3 73,016 + ABZR86_RS18280 0.25 +0.6 73,016 + ABZR86_RS18280 0.25 +0.6 73,017 - ABZR86_RS18280 0.25 -1.2 73,028 + ABZR86_RS18280 0.26 +0.5 73,029 - ABZR86_RS18280 0.26 +1.1 73,101 - ABZR86_RS18280 0.32 +0.3 73,352 + ABZR86_RS18280 0.53 +0.5 73,352 + ABZR86_RS18280 0.53 +0.7 73,352 + ABZR86_RS18280 0.53 +0.9 73,353 - ABZR86_RS18280 0.53 +0.8 73,478 + ABZR86_RS18280 0.64 -0.4 73,592 + ABZR86_RS18280 0.73 +0.5 73,592 + ABZR86_RS18280 0.73 +0.2 73,592 + ABZR86_RS18280 0.73 +0.2 73,592 + ABZR86_RS18280 0.73 -0.3 73,593 - ABZR86_RS18280 0.73 -0.2 73,593 - ABZR86_RS18280 0.73 +0.3 73,593 - ABZR86_RS18280 0.73 +0.3 73,593 - ABZR86_RS18280 0.73 +0.2 73,907 + -0.9 73,907 + -0.0 73,908 - -0.0 73,908 - +0.9 74,152 + +0.1 74,152 + -0.6 74,152 + +0.7 74,152 + +0.9 74,153 - +0.1 74,467 + ABZR86_RS18285 0.17 +0.2 74,531 + ABZR86_RS18285 0.19 +1.2 74,532 - ABZR86_RS18285 0.19 +0.4 74,532 - ABZR86_RS18285 0.19 +0.2 74,532 - ABZR86_RS18285 0.19 -0.9 74,532 - ABZR86_RS18285 0.19 +0.5 74,532 - ABZR86_RS18285 0.19 +1.2 74,532 - ABZR86_RS18285 0.19 +0.2 74,532 - ABZR86_RS18285 0.19 -0.3 74,827 - ABZR86_RS18285 0.29 +0.4 74,990 - ABZR86_RS18285 0.34 -0.0 75,322 + ABZR86_RS18285 0.44 +0.0 75,322 + ABZR86_RS18285 0.44 -0.4 75,323 - ABZR86_RS18285 0.44 -1.1 75,541 + ABZR86_RS18285 0.51 +0.2 75,542 - ABZR86_RS18285 0.51 -0.3 75,542 - ABZR86_RS18285 0.51 +0.6 75,553 + ABZR86_RS18285 0.52 +0.6 75,553 + ABZR86_RS18285 0.52 -0.5 75,553 + ABZR86_RS18285 0.52 -0.5 76,189 + ABZR86_RS18285 0.72 +0.4 76,190 - ABZR86_RS18285 0.72 -0.5 76,190 - ABZR86_RS18285 0.72 -0.2 76,190 - ABZR86_RS18285 0.72 +0.7 76,285 + ABZR86_RS18285 0.75 +0.1 76,286 - ABZR86_RS18285 0.75 +0.7 76,549 + ABZR86_RS18285 0.83 -0.8 76,549 + ABZR86_RS18285 0.83 +0.7 76,549 + ABZR86_RS18285 0.83 -0.8 76,550 - ABZR86_RS18285 0.84 +0.4 76,551 + ABZR86_RS18285 0.84 -0.6 76,551 + ABZR86_RS18285 0.84 +0.2 76,551 + ABZR86_RS18285 0.84 -0.1 76,552 - ABZR86_RS18285 0.84 +0.7 76,552 - ABZR86_RS18285 0.84 +1.1 76,552 - ABZR86_RS18285 0.84 +0.3 76,552 - ABZR86_RS18285 0.84 +1.7 76,697 - ABZR86_RS18285 0.88 +0.2 77,069 - -0.3 77,069 - -0.1 77,069 - +1.4 77,069 - +0.4 77,069 - +0.3 77,145 - -0.4 77,465 + ABZR86_RS18290 0.27 +1.1 77,584 + ABZR86_RS18290 0.34 +0.4 77,615 + ABZR86_RS18290 0.37 -0.3 77,616 - ABZR86_RS18290 0.37 -0.4 77,682 - ABZR86_RS18290 0.41 +0.2 77,688 - ABZR86_RS18290 0.41 +0.8 77,790 - ABZR86_RS18290 0.48 +0.4 77,791 + ABZR86_RS18290 0.48 +0.8 77,792 - ABZR86_RS18290 0.48 -0.6
Or see this region's nucleotide sequence