Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS17735 and ABZR86_RS17740 overlap by 4 nucleotides ABZR86_RS17740 and ABZR86_RS17745 are separated by 7 nucleotides
ABZR86_RS17735: ABZR86_RS17735 - zinc-dependent alcohol dehydrogenase family protein, at 4,003,037 to 4,004,053
_RS17735
ABZR86_RS17740: ABZR86_RS17740 - cyclophilin-like fold protein, at 4,004,050 to 4,004,433
_RS17740
ABZR86_RS17745: ABZR86_RS17745 - alpha/beta hydrolase, at 4,004,441 to 4,005,463
_RS17745
Position (kb)
4004
4005 Strain fitness (log2 ratio)
-1
0
1 at 4003.086 kb on + strand at 4003.087 kb on - strand at 4003.113 kb on - strand at 4003.113 kb on - strand at 4003.282 kb on + strand, within ABZR86_RS17735 at 4003.282 kb on + strand, within ABZR86_RS17735 at 4003.282 kb on + strand, within ABZR86_RS17735 at 4003.282 kb on + strand, within ABZR86_RS17735 at 4003.283 kb on - strand, within ABZR86_RS17735 at 4003.283 kb on - strand, within ABZR86_RS17735 at 4003.283 kb on - strand, within ABZR86_RS17735 at 4003.283 kb on - strand, within ABZR86_RS17735 at 4003.283 kb on - strand, within ABZR86_RS17735 at 4003.423 kb on + strand, within ABZR86_RS17735 at 4003.708 kb on - strand, within ABZR86_RS17735 at 4003.758 kb on + strand, within ABZR86_RS17735 at 4003.873 kb on - strand, within ABZR86_RS17735 at 4003.920 kb on + strand, within ABZR86_RS17735 at 4003.943 kb on + strand, within ABZR86_RS17735 at 4004.225 kb on + strand, within ABZR86_RS17740 at 4004.225 kb on + strand, within ABZR86_RS17740 at 4004.225 kb on + strand, within ABZR86_RS17740 at 4004.225 kb on + strand, within ABZR86_RS17740 at 4004.225 kb on + strand, within ABZR86_RS17740 at 4004.321 kb on + strand, within ABZR86_RS17740 at 4004.538 kb on + strand at 4004.737 kb on - strand, within ABZR86_RS17745 at 4004.792 kb on - strand, within ABZR86_RS17745 at 4004.827 kb on - strand, within ABZR86_RS17745 at 4004.827 kb on - strand, within ABZR86_RS17745 at 4004.891 kb on - strand, within ABZR86_RS17745 at 4005.097 kb on - strand, within ABZR86_RS17745 at 4005.171 kb on - strand, within ABZR86_RS17745 at 4005.201 kb on + strand, within ABZR86_RS17745 at 4005.202 kb on - strand, within ABZR86_RS17745
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 4,003,086 + -1.2 4,003,087 - -0.7 4,003,113 - -0.0 4,003,113 - +0.1 4,003,282 + ABZR86_RS17735 0.24 -0.6 4,003,282 + ABZR86_RS17735 0.24 +0.4 4,003,282 + ABZR86_RS17735 0.24 +0.2 4,003,282 + ABZR86_RS17735 0.24 -0.5 4,003,283 - ABZR86_RS17735 0.24 +0.9 4,003,283 - ABZR86_RS17735 0.24 -0.6 4,003,283 - ABZR86_RS17735 0.24 -0.2 4,003,283 - ABZR86_RS17735 0.24 +0.3 4,003,283 - ABZR86_RS17735 0.24 +0.7 4,003,423 + ABZR86_RS17735 0.38 -0.7 4,003,708 - ABZR86_RS17735 0.66 +0.6 4,003,758 + ABZR86_RS17735 0.71 +0.6 4,003,873 - ABZR86_RS17735 0.82 +0.4 4,003,920 + ABZR86_RS17735 0.87 +0.6 4,003,943 + ABZR86_RS17735 0.89 +1.6 4,004,225 + ABZR86_RS17740 0.46 +0.5 4,004,225 + ABZR86_RS17740 0.46 +1.1 4,004,225 + ABZR86_RS17740 0.46 +0.8 4,004,225 + ABZR86_RS17740 0.46 +0.2 4,004,225 + ABZR86_RS17740 0.46 +0.7 4,004,321 + ABZR86_RS17740 0.71 -0.0 4,004,538 + -0.6 4,004,737 - ABZR86_RS17745 0.29 +0.4 4,004,792 - ABZR86_RS17745 0.34 -0.2 4,004,827 - ABZR86_RS17745 0.38 +0.2 4,004,827 - ABZR86_RS17745 0.38 -0.5 4,004,891 - ABZR86_RS17745 0.44 +0.8 4,005,097 - ABZR86_RS17745 0.64 -0.1 4,005,171 - ABZR86_RS17745 0.71 -0.5 4,005,201 + ABZR86_RS17745 0.74 -0.0 4,005,202 - ABZR86_RS17745 0.74 +0.1
Or see this region's nucleotide sequence