Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS17740

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS17735 and ABZR86_RS17740 overlap by 4 nucleotidesABZR86_RS17740 and ABZR86_RS17745 are separated by 7 nucleotides ABZR86_RS17735: ABZR86_RS17735 - zinc-dependent alcohol dehydrogenase family protein, at 4,003,037 to 4,004,053 _RS17735 ABZR86_RS17740: ABZR86_RS17740 - cyclophilin-like fold protein, at 4,004,050 to 4,004,433 _RS17740 ABZR86_RS17745: ABZR86_RS17745 - alpha/beta hydrolase, at 4,004,441 to 4,005,463 _RS17745 Position (kb) 4004 4005Strain fitness (log2 ratio) -1 0 1at 4003.086 kb on + strandat 4003.087 kb on - strandat 4003.113 kb on - strandat 4003.113 kb on - strandat 4003.282 kb on + strand, within ABZR86_RS17735at 4003.282 kb on + strand, within ABZR86_RS17735at 4003.282 kb on + strand, within ABZR86_RS17735at 4003.282 kb on + strand, within ABZR86_RS17735at 4003.283 kb on - strand, within ABZR86_RS17735at 4003.283 kb on - strand, within ABZR86_RS17735at 4003.283 kb on - strand, within ABZR86_RS17735at 4003.283 kb on - strand, within ABZR86_RS17735at 4003.283 kb on - strand, within ABZR86_RS17735at 4003.423 kb on + strand, within ABZR86_RS17735at 4003.708 kb on - strand, within ABZR86_RS17735at 4003.758 kb on + strand, within ABZR86_RS17735at 4003.873 kb on - strand, within ABZR86_RS17735at 4003.920 kb on + strand, within ABZR86_RS17735at 4003.943 kb on + strand, within ABZR86_RS17735at 4004.225 kb on + strand, within ABZR86_RS17740at 4004.225 kb on + strand, within ABZR86_RS17740at 4004.225 kb on + strand, within ABZR86_RS17740at 4004.225 kb on + strand, within ABZR86_RS17740at 4004.225 kb on + strand, within ABZR86_RS17740at 4004.321 kb on + strand, within ABZR86_RS17740at 4004.538 kb on + strandat 4004.737 kb on - strand, within ABZR86_RS17745at 4004.792 kb on - strand, within ABZR86_RS17745at 4004.827 kb on - strand, within ABZR86_RS17745at 4004.827 kb on - strand, within ABZR86_RS17745at 4004.891 kb on - strand, within ABZR86_RS17745at 4005.097 kb on - strand, within ABZR86_RS17745at 4005.171 kb on - strand, within ABZR86_RS17745at 4005.201 kb on + strand, within ABZR86_RS17745at 4005.202 kb on - strand, within ABZR86_RS17745

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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4,003,086 + -1.2
4,003,087 - -0.7
4,003,113 - -0.0
4,003,113 - +0.1
4,003,282 + ABZR86_RS17735 0.24 -0.6
4,003,282 + ABZR86_RS17735 0.24 +0.4
4,003,282 + ABZR86_RS17735 0.24 +0.2
4,003,282 + ABZR86_RS17735 0.24 -0.5
4,003,283 - ABZR86_RS17735 0.24 +0.9
4,003,283 - ABZR86_RS17735 0.24 -0.6
4,003,283 - ABZR86_RS17735 0.24 -0.2
4,003,283 - ABZR86_RS17735 0.24 +0.3
4,003,283 - ABZR86_RS17735 0.24 +0.7
4,003,423 + ABZR86_RS17735 0.38 -0.7
4,003,708 - ABZR86_RS17735 0.66 +0.6
4,003,758 + ABZR86_RS17735 0.71 +0.6
4,003,873 - ABZR86_RS17735 0.82 +0.4
4,003,920 + ABZR86_RS17735 0.87 +0.6
4,003,943 + ABZR86_RS17735 0.89 +1.6
4,004,225 + ABZR86_RS17740 0.46 +0.5
4,004,225 + ABZR86_RS17740 0.46 +1.1
4,004,225 + ABZR86_RS17740 0.46 +0.8
4,004,225 + ABZR86_RS17740 0.46 +0.2
4,004,225 + ABZR86_RS17740 0.46 +0.7
4,004,321 + ABZR86_RS17740 0.71 -0.0
4,004,538 + -0.6
4,004,737 - ABZR86_RS17745 0.29 +0.4
4,004,792 - ABZR86_RS17745 0.34 -0.2
4,004,827 - ABZR86_RS17745 0.38 +0.2
4,004,827 - ABZR86_RS17745 0.38 -0.5
4,004,891 - ABZR86_RS17745 0.44 +0.8
4,005,097 - ABZR86_RS17745 0.64 -0.1
4,005,171 - ABZR86_RS17745 0.71 -0.5
4,005,201 + ABZR86_RS17745 0.74 -0.0
4,005,202 - ABZR86_RS17745 0.74 +0.1

Or see this region's nucleotide sequence