Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS15575 and ABZR86_RS15580 are separated by 284 nucleotides ABZR86_RS15580 and ABZR86_RS15585 are separated by 235 nucleotides
ABZR86_RS15575: ABZR86_RS15575 - polyamine aminopropyltransferase, at 3,504,581 to 3,505,432
_RS15575
ABZR86_RS15580: ABZR86_RS15580 - biosynthetic arginine decarboxylase, at 3,505,717 to 3,507,606
_RS15580
ABZR86_RS15585: ABZR86_RS15585 - 3-hydroxybutyrate dehydrogenase, at 3,507,842 to 3,508,630
_RS15585
Position (kb)
3505
3506
3507
3508 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3505.482 kb on + strand at 3505.482 kb on + strand at 3505.483 kb on - strand at 3505.483 kb on - strand at 3505.540 kb on + strand at 3505.540 kb on + strand at 3505.540 kb on + strand at 3505.540 kb on + strand at 3505.540 kb on + strand at 3505.540 kb on + strand at 3505.540 kb on + strand at 3505.540 kb on + strand at 3505.540 kb on + strand at 3505.540 kb on + strand at 3505.540 kb on + strand at 3505.540 kb on + strand at 3505.541 kb on - strand at 3505.541 kb on - strand at 3505.541 kb on - strand at 3505.541 kb on - strand at 3505.541 kb on - strand at 3505.541 kb on - strand at 3505.545 kb on + strand at 3505.545 kb on + strand at 3505.545 kb on + strand at 3505.545 kb on + strand at 3505.546 kb on - strand at 3505.546 kb on - strand at 3505.546 kb on - strand at 3505.546 kb on - strand at 3505.584 kb on + strand at 3505.584 kb on + strand at 3505.584 kb on + strand at 3505.584 kb on + strand at 3505.584 kb on + strand at 3505.584 kb on + strand at 3505.585 kb on - strand at 3505.585 kb on - strand at 3505.585 kb on - strand at 3505.585 kb on - strand at 3505.585 kb on - strand at 3505.585 kb on - strand at 3507.655 kb on + strand at 3507.710 kb on - strand at 3507.841 kb on + strand at 3507.841 kb on + strand at 3507.920 kb on + strand at 3507.920 kb on + strand at 3507.921 kb on - strand, within ABZR86_RS15585 at 3508.232 kb on + strand, within ABZR86_RS15585 at 3508.232 kb on + strand, within ABZR86_RS15585 at 3508.232 kb on + strand, within ABZR86_RS15585 at 3508.232 kb on + strand, within ABZR86_RS15585 at 3508.232 kb on + strand, within ABZR86_RS15585 at 3508.232 kb on + strand, within ABZR86_RS15585 at 3508.232 kb on + strand, within ABZR86_RS15585 at 3508.232 kb on + strand, within ABZR86_RS15585 at 3508.232 kb on + strand, within ABZR86_RS15585 at 3508.232 kb on + strand, within ABZR86_RS15585 at 3508.232 kb on + strand, within ABZR86_RS15585 at 3508.232 kb on + strand, within ABZR86_RS15585 at 3508.232 kb on + strand, within ABZR86_RS15585 at 3508.232 kb on + strand, within ABZR86_RS15585 at 3508.232 kb on + strand, within ABZR86_RS15585 at 3508.232 kb on + strand, within ABZR86_RS15585 at 3508.232 kb on + strand, within ABZR86_RS15585 at 3508.232 kb on + strand, within ABZR86_RS15585 at 3508.232 kb on + strand, within ABZR86_RS15585 at 3508.232 kb on + strand, within ABZR86_RS15585 at 3508.232 kb on + strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.233 kb on - strand, within ABZR86_RS15585 at 3508.262 kb on + strand, within ABZR86_RS15585 at 3508.262 kb on + strand, within ABZR86_RS15585 at 3508.262 kb on + strand, within ABZR86_RS15585 at 3508.262 kb on + strand, within ABZR86_RS15585 at 3508.262 kb on + strand, within ABZR86_RS15585 at 3508.262 kb on + strand, within ABZR86_RS15585 at 3508.262 kb on + strand, within ABZR86_RS15585 at 3508.262 kb on + strand, within ABZR86_RS15585 at 3508.262 kb on + strand, within ABZR86_RS15585 at 3508.262 kb on + strand, within ABZR86_RS15585 at 3508.263 kb on - strand, within ABZR86_RS15585 at 3508.263 kb on - strand, within ABZR86_RS15585 at 3508.263 kb on - strand, within ABZR86_RS15585 at 3508.263 kb on - strand, within ABZR86_RS15585 at 3508.263 kb on - strand, within ABZR86_RS15585 at 3508.263 kb on - strand, within ABZR86_RS15585 at 3508.263 kb on - strand, within ABZR86_RS15585 at 3508.263 kb on - strand, within ABZR86_RS15585 at 3508.263 kb on - strand, within ABZR86_RS15585 at 3508.263 kb on - strand, within ABZR86_RS15585 at 3508.310 kb on + strand, within ABZR86_RS15585 at 3508.310 kb on + strand, within ABZR86_RS15585 at 3508.310 kb on + strand, within ABZR86_RS15585 at 3508.311 kb on - strand, within ABZR86_RS15585 at 3508.311 kb on - strand, within ABZR86_RS15585 at 3508.315 kb on + strand, within ABZR86_RS15585
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 3,505,482 + -0.1 3,505,482 + -0.4 3,505,483 - +0.3 3,505,483 - -0.4 3,505,540 + +1.0 3,505,540 + +0.2 3,505,540 + +1.9 3,505,540 + +0.3 3,505,540 + +1.6 3,505,540 + +0.2 3,505,540 + +0.3 3,505,540 + -0.3 3,505,540 + +0.2 3,505,540 + -0.5 3,505,540 + -0.0 3,505,540 + -0.8 3,505,541 - -0.5 3,505,541 - +1.4 3,505,541 - +0.9 3,505,541 - -3.2 3,505,541 - -0.8 3,505,541 - +0.3 3,505,545 + +0.2 3,505,545 + +0.3 3,505,545 + -0.8 3,505,545 + -0.2 3,505,546 - +0.1 3,505,546 - +0.1 3,505,546 - +0.2 3,505,546 - -1.9 3,505,584 + -0.5 3,505,584 + -0.7 3,505,584 + -0.2 3,505,584 + +0.3 3,505,584 + +0.6 3,505,584 + -0.5 3,505,585 - +0.8 3,505,585 - +0.3 3,505,585 - -1.3 3,505,585 - -0.5 3,505,585 - -0.2 3,505,585 - -1.1 3,507,655 + -0.1 3,507,710 - -0.0 3,507,841 + +0.5 3,507,841 + +0.9 3,507,920 + +0.6 3,507,920 + +0.4 3,507,921 - ABZR86_RS15585 0.10 +1.1 3,508,232 + ABZR86_RS15585 0.49 -0.8 3,508,232 + ABZR86_RS15585 0.49 -0.4 3,508,232 + ABZR86_RS15585 0.49 +0.8 3,508,232 + ABZR86_RS15585 0.49 -0.1 3,508,232 + ABZR86_RS15585 0.49 -0.4 3,508,232 + ABZR86_RS15585 0.49 -0.9 3,508,232 + ABZR86_RS15585 0.49 -0.4 3,508,232 + ABZR86_RS15585 0.49 -0.1 3,508,232 + ABZR86_RS15585 0.49 +0.1 3,508,232 + ABZR86_RS15585 0.49 +0.0 3,508,232 + ABZR86_RS15585 0.49 +1.0 3,508,232 + ABZR86_RS15585 0.49 -0.4 3,508,232 + ABZR86_RS15585 0.49 -0.8 3,508,232 + ABZR86_RS15585 0.49 -0.1 3,508,232 + ABZR86_RS15585 0.49 +0.3 3,508,232 + ABZR86_RS15585 0.49 +0.4 3,508,232 + ABZR86_RS15585 0.49 +0.2 3,508,232 + ABZR86_RS15585 0.49 +0.7 3,508,232 + ABZR86_RS15585 0.49 -0.1 3,508,232 + ABZR86_RS15585 0.49 +0.2 3,508,232 + ABZR86_RS15585 0.49 +0.3 3,508,233 - ABZR86_RS15585 0.50 -0.1 3,508,233 - ABZR86_RS15585 0.50 +0.3 3,508,233 - ABZR86_RS15585 0.50 +0.4 3,508,233 - ABZR86_RS15585 0.50 +0.5 3,508,233 - ABZR86_RS15585 0.50 +0.2 3,508,233 - ABZR86_RS15585 0.50 -1.0 3,508,233 - ABZR86_RS15585 0.50 +1.0 3,508,233 - ABZR86_RS15585 0.50 -0.4 3,508,233 - ABZR86_RS15585 0.50 -0.0 3,508,233 - ABZR86_RS15585 0.50 -0.5 3,508,233 - ABZR86_RS15585 0.50 -0.3 3,508,233 - ABZR86_RS15585 0.50 +0.2 3,508,233 - ABZR86_RS15585 0.50 +0.1 3,508,233 - ABZR86_RS15585 0.50 -0.4 3,508,233 - ABZR86_RS15585 0.50 -1.3 3,508,233 - ABZR86_RS15585 0.50 -0.1 3,508,233 - ABZR86_RS15585 0.50 +0.6 3,508,233 - ABZR86_RS15585 0.50 +0.4 3,508,233 - ABZR86_RS15585 0.50 -0.1 3,508,233 - ABZR86_RS15585 0.50 -0.0 3,508,233 - ABZR86_RS15585 0.50 -1.0 3,508,233 - ABZR86_RS15585 0.50 +0.2 3,508,233 - ABZR86_RS15585 0.50 +0.2 3,508,233 - ABZR86_RS15585 0.50 -0.4 3,508,233 - ABZR86_RS15585 0.50 +0.1 3,508,233 - ABZR86_RS15585 0.50 +0.2 3,508,233 - ABZR86_RS15585 0.50 +0.0 3,508,262 + ABZR86_RS15585 0.53 +0.4 3,508,262 + ABZR86_RS15585 0.53 +0.1 3,508,262 + ABZR86_RS15585 0.53 -0.1 3,508,262 + ABZR86_RS15585 0.53 -1.9 3,508,262 + ABZR86_RS15585 0.53 -0.8 3,508,262 + ABZR86_RS15585 0.53 -1.2 3,508,262 + ABZR86_RS15585 0.53 -1.1 3,508,262 + ABZR86_RS15585 0.53 +1.0 3,508,262 + ABZR86_RS15585 0.53 +0.3 3,508,262 + ABZR86_RS15585 0.53 +0.8 3,508,263 - ABZR86_RS15585 0.53 +0.1 3,508,263 - ABZR86_RS15585 0.53 -0.5 3,508,263 - ABZR86_RS15585 0.53 +0.8 3,508,263 - ABZR86_RS15585 0.53 +0.2 3,508,263 - ABZR86_RS15585 0.53 -1.0 3,508,263 - ABZR86_RS15585 0.53 -1.0 3,508,263 - ABZR86_RS15585 0.53 +0.4 3,508,263 - ABZR86_RS15585 0.53 +0.3 3,508,263 - ABZR86_RS15585 0.53 +0.5 3,508,263 - ABZR86_RS15585 0.53 +0.1 3,508,310 + ABZR86_RS15585 0.59 -0.2 3,508,310 + ABZR86_RS15585 0.59 -0.8 3,508,310 + ABZR86_RS15585 0.59 -1.1 3,508,311 - ABZR86_RS15585 0.59 -1.1 3,508,311 - ABZR86_RS15585 0.59 -0.8 3,508,315 + ABZR86_RS15585 0.60 -1.1
Or see this region's nucleotide sequence