Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS14625 and ABZR86_RS14630 are separated by 558 nucleotides ABZR86_RS14630 and ABZR86_RS14635 are separated by 899 nucleotides
ABZR86_RS14625: ABZR86_RS14625 - EF-hand domain-containing protein, at 3,270,624 to 3,270,935
_RS14625
ABZR86_RS14630: ABZR86_RS14630 - serine protease, at 3,271,494 to 3,273,470
_RS14630
ABZR86_RS14635: ABZR86_RS14635 - hypothetical protein, at 3,274,370 to 3,274,723
_RS14635
Position (kb)
3271
3272
3273
3274 Strain fitness (log2 ratio)
-2
-1
0
1 at 3270.705 kb on + strand, within ABZR86_RS14625 at 3270.716 kb on + strand, within ABZR86_RS14625 at 3270.961 kb on - strand at 3270.961 kb on - strand at 3270.961 kb on - strand at 3270.964 kb on - strand at 3271.477 kb on + strand at 3271.495 kb on + strand at 3271.496 kb on - strand at 3271.591 kb on + strand at 3271.591 kb on + strand at 3271.592 kb on - strand at 3271.596 kb on - strand at 3271.712 kb on - strand, within ABZR86_RS14630 at 3271.857 kb on + strand, within ABZR86_RS14630 at 3271.858 kb on - strand, within ABZR86_RS14630 at 3271.930 kb on + strand, within ABZR86_RS14630 at 3271.930 kb on + strand, within ABZR86_RS14630 at 3271.930 kb on + strand, within ABZR86_RS14630 at 3272.053 kb on + strand, within ABZR86_RS14630 at 3272.089 kb on + strand, within ABZR86_RS14630 at 3272.152 kb on + strand, within ABZR86_RS14630 at 3272.152 kb on + strand, within ABZR86_RS14630 at 3272.153 kb on - strand, within ABZR86_RS14630 at 3272.227 kb on + strand, within ABZR86_RS14630 at 3272.422 kb on + strand, within ABZR86_RS14630 at 3272.639 kb on - strand, within ABZR86_RS14630 at 3272.795 kb on - strand, within ABZR86_RS14630 at 3272.950 kb on + strand, within ABZR86_RS14630 at 3273.001 kb on + strand, within ABZR86_RS14630 at 3273.001 kb on + strand, within ABZR86_RS14630 at 3273.124 kb on + strand, within ABZR86_RS14630 at 3273.124 kb on + strand, within ABZR86_RS14630 at 3273.250 kb on + strand, within ABZR86_RS14630 at 3273.250 kb on + strand, within ABZR86_RS14630 at 3273.250 kb on + strand, within ABZR86_RS14630 at 3273.304 kb on + strand at 3273.340 kb on - strand at 3273.488 kb on + strand at 3273.495 kb on - strand at 3274.270 kb on + strand at 3274.320 kb on + strand at 3274.321 kb on - strand at 3274.321 kb on - strand at 3274.321 kb on - strand at 3274.321 kb on - strand at 3274.366 kb on - strand at 3274.366 kb on - strand at 3274.376 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 3,270,705 + ABZR86_RS14625 0.26 +0.5 3,270,716 + ABZR86_RS14625 0.29 +0.4 3,270,961 - +0.8 3,270,961 - -0.7 3,270,961 - -0.6 3,270,964 - -0.9 3,271,477 + +0.4 3,271,495 + -0.1 3,271,496 - -0.2 3,271,591 + -1.0 3,271,591 + -2.7 3,271,592 - -0.2 3,271,596 - -0.8 3,271,712 - ABZR86_RS14630 0.11 -0.8 3,271,857 + ABZR86_RS14630 0.18 +0.1 3,271,858 - ABZR86_RS14630 0.18 +0.7 3,271,930 + ABZR86_RS14630 0.22 +0.2 3,271,930 + ABZR86_RS14630 0.22 +1.1 3,271,930 + ABZR86_RS14630 0.22 -0.3 3,272,053 + ABZR86_RS14630 0.28 -0.4 3,272,089 + ABZR86_RS14630 0.30 +0.1 3,272,152 + ABZR86_RS14630 0.33 -0.4 3,272,152 + ABZR86_RS14630 0.33 +1.1 3,272,153 - ABZR86_RS14630 0.33 -0.7 3,272,227 + ABZR86_RS14630 0.37 -0.2 3,272,422 + ABZR86_RS14630 0.47 +0.5 3,272,639 - ABZR86_RS14630 0.58 -0.4 3,272,795 - ABZR86_RS14630 0.66 +0.3 3,272,950 + ABZR86_RS14630 0.74 -0.4 3,273,001 + ABZR86_RS14630 0.76 +0.4 3,273,001 + ABZR86_RS14630 0.76 +0.0 3,273,124 + ABZR86_RS14630 0.82 -0.9 3,273,124 + ABZR86_RS14630 0.82 -0.6 3,273,250 + ABZR86_RS14630 0.89 -0.8 3,273,250 + ABZR86_RS14630 0.89 -0.3 3,273,250 + ABZR86_RS14630 0.89 -0.1 3,273,304 + +0.7 3,273,340 - +0.1 3,273,488 + +0.5 3,273,495 - -1.0 3,274,270 + -0.5 3,274,320 + -0.4 3,274,321 - -1.5 3,274,321 - -0.0 3,274,321 - -2.3 3,274,321 - +0.3 3,274,366 - -0.2 3,274,366 - -0.4 3,274,376 - +0.3
Or see this region's nucleotide sequence