Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS11730 and ABZR86_RS11735 are separated by 105 nucleotides ABZR86_RS11735 and ABZR86_RS11740 are separated by 226 nucleotides
ABZR86_RS11730: ABZR86_RS11730 - fumarylacetoacetate hydrolase family protein, at 2,628,609 to 2,629,295
_RS11730
ABZR86_RS11735: ABZR86_RS11735 - large-conductance mechanosensitive channel protein MscL, at 2,629,401 to 2,629,811
_RS11735
ABZR86_RS11740: ABZR86_RS11740 - M20/M25/M40 family metallo-hydrolase, at 2,630,038 to 2,631,480
_RS11740
Position (kb)
2629
2630 Strain fitness (log2 ratio)
-2
-1
0
1 at 2628.491 kb on + strand at 2628.492 kb on - strand at 2628.492 kb on - strand at 2628.492 kb on - strand at 2628.525 kb on + strand at 2628.526 kb on - strand at 2628.551 kb on - strand at 2628.566 kb on + strand at 2628.566 kb on + strand at 2628.566 kb on + strand at 2628.566 kb on + strand at 2628.566 kb on + strand at 2628.566 kb on + strand at 2628.567 kb on - strand at 2628.567 kb on - strand at 2628.589 kb on + strand at 2628.590 kb on - strand at 2628.615 kb on + strand at 2628.615 kb on + strand at 2628.615 kb on + strand at 2628.615 kb on + strand at 2628.615 kb on + strand at 2628.615 kb on + strand at 2628.616 kb on - strand at 2628.616 kb on - strand at 2628.616 kb on - strand at 2628.616 kb on - strand at 2628.616 kb on - strand at 2628.654 kb on + strand at 2628.654 kb on + strand at 2628.654 kb on + strand at 2628.709 kb on - strand, within ABZR86_RS11730 at 2629.291 kb on + strand at 2629.291 kb on + strand at 2629.291 kb on + strand at 2629.292 kb on - strand at 2629.292 kb on - strand at 2629.292 kb on - strand at 2629.293 kb on + strand at 2629.638 kb on + strand, within ABZR86_RS11735 at 2629.809 kb on + strand at 2629.809 kb on + strand at 2629.810 kb on - strand at 2629.831 kb on - strand at 2629.851 kb on + strand at 2629.851 kb on + strand at 2629.852 kb on - strand at 2629.852 kb on - strand at 2629.935 kb on - strand at 2629.942 kb on - strand at 2629.942 kb on - strand at 2629.956 kb on - strand at 2629.956 kb on - strand at 2629.956 kb on - strand at 2629.956 kb on - strand at 2630.055 kb on + strand at 2630.055 kb on + strand at 2630.056 kb on - strand at 2630.056 kb on - strand at 2630.283 kb on - strand, within ABZR86_RS11740 at 2630.308 kb on + strand, within ABZR86_RS11740 at 2630.309 kb on - strand, within ABZR86_RS11740 at 2630.309 kb on - strand, within ABZR86_RS11740 at 2630.309 kb on - strand, within ABZR86_RS11740 at 2630.309 kb on - strand, within ABZR86_RS11740 at 2630.327 kb on - strand, within ABZR86_RS11740 at 2630.407 kb on + strand, within ABZR86_RS11740 at 2630.408 kb on - strand, within ABZR86_RS11740
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,628,491 + +1.7 2,628,492 - +0.2 2,628,492 - +0.4 2,628,492 - -0.2 2,628,525 + +0.1 2,628,526 - -0.2 2,628,551 - +1.0 2,628,566 + -0.9 2,628,566 + -0.0 2,628,566 + -0.6 2,628,566 + -0.0 2,628,566 + +0.3 2,628,566 + -0.2 2,628,567 - -2.4 2,628,567 - -0.0 2,628,589 + -1.9 2,628,590 - -0.5 2,628,615 + -0.9 2,628,615 + -1.0 2,628,615 + -1.0 2,628,615 + -0.8 2,628,615 + +0.1 2,628,615 + -1.4 2,628,616 - +0.2 2,628,616 - -0.7 2,628,616 - -0.9 2,628,616 - -0.5 2,628,616 - +0.5 2,628,654 + +0.3 2,628,654 + +0.3 2,628,654 + +0.4 2,628,709 - ABZR86_RS11730 0.15 +0.2 2,629,291 + +0.4 2,629,291 + -0.3 2,629,291 + +0.1 2,629,292 - +0.5 2,629,292 - +1.2 2,629,292 - -0.1 2,629,293 + +0.5 2,629,638 + ABZR86_RS11735 0.58 -0.6 2,629,809 + +0.3 2,629,809 + -0.7 2,629,810 - -0.4 2,629,831 - +1.2 2,629,851 + -1.0 2,629,851 + -0.0 2,629,852 - -2.0 2,629,852 - +0.0 2,629,935 - +0.8 2,629,942 - +0.7 2,629,942 - +0.4 2,629,956 - -0.5 2,629,956 - -1.9 2,629,956 - -0.8 2,629,956 - -0.1 2,630,055 + +0.8 2,630,055 + +1.5 2,630,056 - +0.2 2,630,056 - +0.9 2,630,283 - ABZR86_RS11740 0.17 -0.4 2,630,308 + ABZR86_RS11740 0.19 +0.2 2,630,309 - ABZR86_RS11740 0.19 +1.1 2,630,309 - ABZR86_RS11740 0.19 -0.1 2,630,309 - ABZR86_RS11740 0.19 +1.5 2,630,309 - ABZR86_RS11740 0.19 +0.1 2,630,327 - ABZR86_RS11740 0.20 +0.5 2,630,407 + ABZR86_RS11740 0.26 +0.5 2,630,408 - ABZR86_RS11740 0.26 +0.5
Or see this region's nucleotide sequence