Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS10980 and ABZR86_RS10985 are separated by 91 nucleotides ABZR86_RS10985 and ABZR86_RS10990 are separated by 327 nucleotides
ABZR86_RS10980: ABZR86_RS10980 - NAD+ synthase, at 2,438,721 to 2,440,352
_RS10980
ABZR86_RS10985: ABZR86_RS10985 - LysE/ArgO family amino acid transporter, at 2,440,444 to 2,441,061
_RS10985
ABZR86_RS10990: ABZR86_RS10990 - LysR family transcriptional regulator ArgP, at 2,441,389 to 2,442,291
_RS10990
Position (kb)
2440
2441
2442 Strain fitness (log2 ratio)
-2
-1
0
1 at 2440.387 kb on + strand at 2440.387 kb on + strand at 2440.565 kb on + strand, within ABZR86_RS10985 at 2440.565 kb on + strand, within ABZR86_RS10985 at 2440.640 kb on + strand, within ABZR86_RS10985 at 2440.640 kb on + strand, within ABZR86_RS10985 at 2440.640 kb on + strand, within ABZR86_RS10985 at 2440.640 kb on + strand, within ABZR86_RS10985 at 2440.641 kb on - strand, within ABZR86_RS10985 at 2440.641 kb on - strand, within ABZR86_RS10985 at 2440.641 kb on - strand, within ABZR86_RS10985 at 2440.641 kb on - strand, within ABZR86_RS10985 at 2440.682 kb on + strand, within ABZR86_RS10985 at 2440.682 kb on + strand, within ABZR86_RS10985 at 2440.682 kb on + strand, within ABZR86_RS10985 at 2440.682 kb on + strand, within ABZR86_RS10985 at 2440.682 kb on + strand, within ABZR86_RS10985 at 2440.682 kb on + strand, within ABZR86_RS10985 at 2440.812 kb on - strand, within ABZR86_RS10985 at 2440.838 kb on + strand, within ABZR86_RS10985 at 2441.046 kb on - strand at 2441.067 kb on + strand at 2441.067 kb on + strand at 2441.068 kb on - strand at 2441.068 kb on - strand at 2441.190 kb on - strand at 2442.052 kb on + strand, within ABZR86_RS10990 at 2442.052 kb on + strand, within ABZR86_RS10990 at 2442.053 kb on - strand, within ABZR86_RS10990 at 2442.053 kb on - strand, within ABZR86_RS10990 at 2442.053 kb on - strand, within ABZR86_RS10990 at 2442.053 kb on - strand, within ABZR86_RS10990 at 2442.053 kb on - strand, within ABZR86_RS10990 at 2442.053 kb on - strand, within ABZR86_RS10990 at 2442.053 kb on - strand, within ABZR86_RS10990
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,440,387 + -1.7 2,440,387 + +0.4 2,440,565 + ABZR86_RS10985 0.20 -0.9 2,440,565 + ABZR86_RS10985 0.20 -0.7 2,440,640 + ABZR86_RS10985 0.32 -0.1 2,440,640 + ABZR86_RS10985 0.32 -0.4 2,440,640 + ABZR86_RS10985 0.32 -0.2 2,440,640 + ABZR86_RS10985 0.32 +0.1 2,440,641 - ABZR86_RS10985 0.32 +0.1 2,440,641 - ABZR86_RS10985 0.32 +0.5 2,440,641 - ABZR86_RS10985 0.32 +0.4 2,440,641 - ABZR86_RS10985 0.32 +0.2 2,440,682 + ABZR86_RS10985 0.39 -0.3 2,440,682 + ABZR86_RS10985 0.39 -0.5 2,440,682 + ABZR86_RS10985 0.39 -0.1 2,440,682 + ABZR86_RS10985 0.39 +0.1 2,440,682 + ABZR86_RS10985 0.39 -1.6 2,440,682 + ABZR86_RS10985 0.39 -0.2 2,440,812 - ABZR86_RS10985 0.60 -0.3 2,440,838 + ABZR86_RS10985 0.64 +0.6 2,441,046 - -0.4 2,441,067 + +0.7 2,441,067 + -2.1 2,441,068 - -2.2 2,441,068 - +0.3 2,441,190 - -0.1 2,442,052 + ABZR86_RS10990 0.73 -0.4 2,442,052 + ABZR86_RS10990 0.73 +0.5 2,442,053 - ABZR86_RS10990 0.74 -0.1 2,442,053 - ABZR86_RS10990 0.74 -2.7 2,442,053 - ABZR86_RS10990 0.74 -1.7 2,442,053 - ABZR86_RS10990 0.74 +0.3 2,442,053 - ABZR86_RS10990 0.74 -0.3 2,442,053 - ABZR86_RS10990 0.74 -0.1 2,442,053 - ABZR86_RS10990 0.74 -0.1
Or see this region's nucleotide sequence