Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS10705 and ABZR86_RS10710 are separated by 107 nucleotides ABZR86_RS10710 and ABZR86_RS10715 are separated by 143 nucleotides
ABZR86_RS10705: ABZR86_RS10705 - bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD, at 2,378,186 to 2,379,238
_RS10705
ABZR86_RS10710: ABZR86_RS10710 - transcriptional regulator NrdR, at 2,379,346 to 2,379,864
_RS10710
ABZR86_RS10715: ABZR86_RS10715 - serine hydroxymethyltransferase, at 2,380,008 to 2,381,261
_RS10715
Position (kb)
2379
2380 Strain fitness (log2 ratio)
-2
-1
0
1 at 2379.318 kb on + strand at 2379.319 kb on - strand at 2379.347 kb on + strand at 2379.347 kb on + strand at 2379.347 kb on + strand at 2379.347 kb on + strand at 2379.348 kb on - strand at 2379.348 kb on - strand at 2379.495 kb on - strand, within ABZR86_RS10710 at 2379.495 kb on - strand, within ABZR86_RS10710 at 2379.495 kb on - strand, within ABZR86_RS10710 at 2379.897 kb on + strand at 2379.898 kb on - strand at 2379.898 kb on - strand at 2379.898 kb on - strand at 2379.898 kb on - strand at 2380.016 kb on - strand at 2380.028 kb on + strand at 2380.028 kb on + strand at 2380.029 kb on - strand at 2380.029 kb on - strand at 2380.239 kb on - strand, within ABZR86_RS10715 at 2380.342 kb on + strand, within ABZR86_RS10715 at 2380.402 kb on + strand, within ABZR86_RS10715 at 2380.402 kb on + strand, within ABZR86_RS10715 at 2380.402 kb on + strand, within ABZR86_RS10715 at 2380.402 kb on + strand, within ABZR86_RS10715 at 2380.403 kb on - strand, within ABZR86_RS10715 at 2380.403 kb on - strand, within ABZR86_RS10715 at 2380.624 kb on + strand, within ABZR86_RS10715 at 2380.624 kb on + strand, within ABZR86_RS10715 at 2380.675 kb on + strand, within ABZR86_RS10715 at 2380.675 kb on + strand, within ABZR86_RS10715 at 2380.675 kb on + strand, within ABZR86_RS10715 at 2380.676 kb on - strand, within ABZR86_RS10715 at 2380.676 kb on - strand, within ABZR86_RS10715 at 2380.733 kb on - strand, within ABZR86_RS10715 at 2380.798 kb on + strand, within ABZR86_RS10715 at 2380.799 kb on - strand, within ABZR86_RS10715 at 2380.799 kb on - strand, within ABZR86_RS10715 at 2380.828 kb on + strand, within ABZR86_RS10715 at 2380.829 kb on - strand, within ABZR86_RS10715
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,379,318 + +0.3 2,379,319 - +0.1 2,379,347 + -1.2 2,379,347 + +0.1 2,379,347 + +0.0 2,379,347 + -0.0 2,379,348 - -1.0 2,379,348 - -0.9 2,379,495 - ABZR86_RS10710 0.29 -2.1 2,379,495 - ABZR86_RS10710 0.29 -2.5 2,379,495 - ABZR86_RS10710 0.29 -1.4 2,379,897 + -2.0 2,379,898 - -0.1 2,379,898 - -0.5 2,379,898 - -1.0 2,379,898 - -0.6 2,380,016 - -1.5 2,380,028 + +0.3 2,380,028 + -1.4 2,380,029 - -1.8 2,380,029 - -0.7 2,380,239 - ABZR86_RS10715 0.18 -1.4 2,380,342 + ABZR86_RS10715 0.27 -1.7 2,380,402 + ABZR86_RS10715 0.31 +0.1 2,380,402 + ABZR86_RS10715 0.31 -0.4 2,380,402 + ABZR86_RS10715 0.31 -0.7 2,380,402 + ABZR86_RS10715 0.31 -1.4 2,380,403 - ABZR86_RS10715 0.31 -1.6 2,380,403 - ABZR86_RS10715 0.31 -0.2 2,380,624 + ABZR86_RS10715 0.49 -1.0 2,380,624 + ABZR86_RS10715 0.49 -0.1 2,380,675 + ABZR86_RS10715 0.53 +0.8 2,380,675 + ABZR86_RS10715 0.53 -0.0 2,380,675 + ABZR86_RS10715 0.53 -0.5 2,380,676 - ABZR86_RS10715 0.53 -0.2 2,380,676 - ABZR86_RS10715 0.53 -1.5 2,380,733 - ABZR86_RS10715 0.58 -0.8 2,380,798 + ABZR86_RS10715 0.63 -0.3 2,380,799 - ABZR86_RS10715 0.63 -0.4 2,380,799 - ABZR86_RS10715 0.63 -0.0 2,380,828 + ABZR86_RS10715 0.65 +1.6 2,380,829 - ABZR86_RS10715 0.65 -1.5
Or see this region's nucleotide sequence