Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS10330 and ABZR86_RS10335 are separated by 412 nucleotides ABZR86_RS10335 and ABZR86_RS10340 overlap by 4 nucleotides
ABZR86_RS10330: ABZR86_RS10330 - DUF6531 domain-containing protein, at 2,288,864 to 2,290,471
_RS10330
ABZR86_RS10335: ABZR86_RS10335 - chemotaxis protein CheW, at 2,290,884 to 2,291,360
_RS10335
ABZR86_RS10340: ABZR86_RS10340 - chemotaxis protein CheB, at 2,291,357 to 2,293,123
_RS10340
Position (kb)
2290
2291
2292 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2289.906 kb on + strand, within ABZR86_RS10330 at 2289.906 kb on + strand, within ABZR86_RS10330 at 2289.906 kb on + strand, within ABZR86_RS10330 at 2290.001 kb on - strand, within ABZR86_RS10330 at 2290.065 kb on + strand, within ABZR86_RS10330 at 2290.095 kb on + strand, within ABZR86_RS10330 at 2290.096 kb on - strand, within ABZR86_RS10330 at 2290.107 kb on + strand, within ABZR86_RS10330 at 2290.137 kb on + strand, within ABZR86_RS10330 at 2290.146 kb on + strand, within ABZR86_RS10330 at 2290.174 kb on + strand, within ABZR86_RS10330 at 2290.174 kb on + strand, within ABZR86_RS10330 at 2290.174 kb on + strand, within ABZR86_RS10330 at 2290.175 kb on - strand, within ABZR86_RS10330 at 2290.209 kb on + strand, within ABZR86_RS10330 at 2290.230 kb on + strand, within ABZR86_RS10330 at 2290.231 kb on - strand, within ABZR86_RS10330 at 2290.291 kb on - strand, within ABZR86_RS10330 at 2290.305 kb on + strand, within ABZR86_RS10330 at 2290.305 kb on + strand, within ABZR86_RS10330 at 2290.323 kb on + strand at 2290.324 kb on - strand at 2290.324 kb on - strand at 2290.324 kb on - strand at 2290.464 kb on + strand at 2290.465 kb on - strand at 2290.465 kb on - strand at 2290.465 kb on - strand at 2290.465 kb on - strand at 2290.644 kb on + strand at 2290.645 kb on - strand at 2290.652 kb on - strand at 2290.662 kb on - strand at 2290.662 kb on - strand at 2290.662 kb on - strand at 2290.725 kb on - strand at 2290.777 kb on - strand at 2290.788 kb on + strand at 2290.811 kb on - strand at 2290.843 kb on + strand at 2290.843 kb on + strand at 2290.844 kb on - strand at 2290.844 kb on - strand at 2290.859 kb on + strand at 2291.019 kb on - strand, within ABZR86_RS10335 at 2291.039 kb on + strand, within ABZR86_RS10335 at 2291.039 kb on + strand, within ABZR86_RS10335 at 2291.063 kb on + strand, within ABZR86_RS10335 at 2291.169 kb on - strand, within ABZR86_RS10335 at 2291.169 kb on - strand, within ABZR86_RS10335 at 2291.207 kb on + strand, within ABZR86_RS10335 at 2291.461 kb on - strand at 2291.804 kb on + strand, within ABZR86_RS10340 at 2291.805 kb on - strand, within ABZR86_RS10340
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,289,906 + ABZR86_RS10330 0.65 -0.6 2,289,906 + ABZR86_RS10330 0.65 +0.3 2,289,906 + ABZR86_RS10330 0.65 +1.3 2,290,001 - ABZR86_RS10330 0.71 +0.3 2,290,065 + ABZR86_RS10330 0.75 +0.4 2,290,095 + ABZR86_RS10330 0.77 +0.2 2,290,096 - ABZR86_RS10330 0.77 +0.4 2,290,107 + ABZR86_RS10330 0.77 -0.1 2,290,137 + ABZR86_RS10330 0.79 +0.1 2,290,146 + ABZR86_RS10330 0.80 +2.4 2,290,174 + ABZR86_RS10330 0.81 +0.0 2,290,174 + ABZR86_RS10330 0.81 +0.1 2,290,174 + ABZR86_RS10330 0.81 +0.4 2,290,175 - ABZR86_RS10330 0.82 -0.1 2,290,209 + ABZR86_RS10330 0.84 +0.2 2,290,230 + ABZR86_RS10330 0.85 -0.9 2,290,231 - ABZR86_RS10330 0.85 -0.9 2,290,291 - ABZR86_RS10330 0.89 +0.4 2,290,305 + ABZR86_RS10330 0.90 -0.2 2,290,305 + ABZR86_RS10330 0.90 -0.6 2,290,323 + +0.2 2,290,324 - +0.7 2,290,324 - +0.1 2,290,324 - +0.2 2,290,464 + +0.7 2,290,465 - +0.5 2,290,465 - +2.5 2,290,465 - -0.0 2,290,465 - -1.9 2,290,644 + -0.5 2,290,645 - +0.1 2,290,652 - -0.3 2,290,662 - +0.6 2,290,662 - +0.6 2,290,662 - -0.2 2,290,725 - -1.5 2,290,777 - +0.5 2,290,788 + +0.8 2,290,811 - -1.5 2,290,843 + +0.5 2,290,843 + -0.4 2,290,844 - +0.9 2,290,844 - +0.5 2,290,859 + +1.1 2,291,019 - ABZR86_RS10335 0.28 +0.2 2,291,039 + ABZR86_RS10335 0.32 +0.1 2,291,039 + ABZR86_RS10335 0.32 -1.5 2,291,063 + ABZR86_RS10335 0.38 -0.0 2,291,169 - ABZR86_RS10335 0.60 -0.1 2,291,169 - ABZR86_RS10335 0.60 -0.2 2,291,207 + ABZR86_RS10335 0.68 -0.2 2,291,461 - -0.5 2,291,804 + ABZR86_RS10340 0.25 -0.4 2,291,805 - ABZR86_RS10340 0.25 -1.3
Or see this region's nucleotide sequence