Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS09750 and ABZR86_RS09755 are separated by 150 nucleotides ABZR86_RS09755 and ABZR86_RS09760 are separated by 93 nucleotides ABZR86_RS09760 and ABZR86_RS09765 are separated by 128 nucleotides
ABZR86_RS09750: ABZR86_RS09750 - excinuclease ABC subunit UvrB, at 2,166,022 to 2,168,043
_RS09750
ABZR86_RS09755: ABZR86_RS09755 - GspH/FimT family pseudopilin, at 2,168,194 to 2,168,745
_RS09755
ABZR86_RS09760: ABZR86_RS09760 - RidA family protein, at 2,168,839 to 2,169,234
_RS09760
ABZR86_RS09765: ABZR86_RS09765 - LysR family transcriptional regulator, at 2,169,363 to 2,170,277
_RS09765
Position (kb)
2168
2169
2170 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2167.876 kb on + strand at 2167.876 kb on + strand at 2168.075 kb on + strand at 2168.076 kb on - strand at 2168.113 kb on + strand at 2168.113 kb on + strand at 2168.114 kb on - strand at 2168.114 kb on - strand at 2168.161 kb on + strand at 2168.161 kb on + strand at 2168.161 kb on + strand at 2168.161 kb on + strand at 2168.162 kb on - strand at 2168.162 kb on - strand at 2168.162 kb on - strand at 2168.162 kb on - strand at 2168.162 kb on - strand at 2168.162 kb on - strand at 2168.162 kb on - strand at 2168.162 kb on - strand at 2168.162 kb on - strand at 2168.162 kb on - strand at 2168.162 kb on - strand at 2168.419 kb on - strand, within ABZR86_RS09755 at 2168.693 kb on + strand at 2168.694 kb on - strand at 2168.694 kb on - strand at 2168.694 kb on - strand at 2168.729 kb on + strand at 2168.730 kb on - strand at 2168.730 kb on - strand at 2168.730 kb on - strand at 2168.942 kb on + strand, within ABZR86_RS09760 at 2168.942 kb on + strand, within ABZR86_RS09760 at 2168.943 kb on - strand, within ABZR86_RS09760 at 2168.943 kb on - strand, within ABZR86_RS09760 at 2168.996 kb on + strand, within ABZR86_RS09760 at 2169.004 kb on + strand, within ABZR86_RS09760 at 2169.004 kb on + strand, within ABZR86_RS09760 at 2169.004 kb on + strand, within ABZR86_RS09760 at 2169.005 kb on - strand, within ABZR86_RS09760 at 2169.005 kb on - strand, within ABZR86_RS09760 at 2169.005 kb on - strand, within ABZR86_RS09760 at 2169.005 kb on - strand, within ABZR86_RS09760 at 2169.173 kb on + strand, within ABZR86_RS09760 at 2169.189 kb on - strand, within ABZR86_RS09760 at 2169.189 kb on - strand, within ABZR86_RS09760 at 2169.189 kb on - strand, within ABZR86_RS09760 at 2169.189 kb on - strand, within ABZR86_RS09760 at 2169.276 kb on + strand at 2169.276 kb on + strand at 2169.277 kb on - strand at 2169.277 kb on - strand at 2169.277 kb on - strand at 2169.297 kb on + strand at 2169.328 kb on - strand at 2169.556 kb on - strand, within ABZR86_RS09765 at 2169.558 kb on + strand, within ABZR86_RS09765 at 2169.558 kb on + strand, within ABZR86_RS09765 at 2169.558 kb on + strand, within ABZR86_RS09765 at 2169.559 kb on - strand, within ABZR86_RS09765 at 2169.628 kb on + strand, within ABZR86_RS09765 at 2169.628 kb on + strand, within ABZR86_RS09765 at 2169.628 kb on + strand, within ABZR86_RS09765 at 2169.629 kb on - strand, within ABZR86_RS09765 at 2169.714 kb on + strand, within ABZR86_RS09765 at 2169.833 kb on + strand, within ABZR86_RS09765 at 2169.858 kb on + strand, within ABZR86_RS09765 at 2169.858 kb on + strand, within ABZR86_RS09765 at 2169.858 kb on + strand, within ABZR86_RS09765 at 2169.858 kb on + strand, within ABZR86_RS09765 at 2169.859 kb on - strand, within ABZR86_RS09765 at 2169.859 kb on - strand, within ABZR86_RS09765 at 2169.859 kb on - strand, within ABZR86_RS09765 at 2169.874 kb on - strand, within ABZR86_RS09765 at 2169.943 kb on - strand, within ABZR86_RS09765 at 2169.943 kb on - strand, within ABZR86_RS09765 at 2169.943 kb on - strand, within ABZR86_RS09765 at 2169.943 kb on - strand, within ABZR86_RS09765 at 2169.943 kb on - strand, within ABZR86_RS09765 at 2169.975 kb on + strand, within ABZR86_RS09765 at 2169.975 kb on + strand, within ABZR86_RS09765 at 2169.975 kb on + strand, within ABZR86_RS09765 at 2169.976 kb on - strand, within ABZR86_RS09765 at 2170.003 kb on + strand, within ABZR86_RS09765 at 2170.050 kb on + strand, within ABZR86_RS09765 at 2170.050 kb on + strand, within ABZR86_RS09765 at 2170.050 kb on + strand, within ABZR86_RS09765 at 2170.050 kb on + strand, within ABZR86_RS09765 at 2170.051 kb on - strand, within ABZR86_RS09765 at 2170.051 kb on - strand, within ABZR86_RS09765 at 2170.098 kb on + strand, within ABZR86_RS09765 at 2170.099 kb on - strand, within ABZR86_RS09765 at 2170.099 kb on - strand, within ABZR86_RS09765 at 2170.099 kb on - strand, within ABZR86_RS09765 at 2170.099 kb on - strand, within ABZR86_RS09765 at 2170.099 kb on - strand, within ABZR86_RS09765 at 2170.099 kb on - strand, within ABZR86_RS09765 at 2170.099 kb on - strand, within ABZR86_RS09765 at 2170.177 kb on - strand, within ABZR86_RS09765 at 2170.204 kb on + strand at 2170.204 kb on + strand at 2170.204 kb on + strand at 2170.204 kb on + strand at 2170.205 kb on - strand at 2170.205 kb on - strand at 2170.205 kb on - strand at 2170.205 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,167,876 + +0.1 2,167,876 + -0.3 2,168,075 + +0.7 2,168,076 - -1.4 2,168,113 + -0.7 2,168,113 + +0.3 2,168,114 - +0.4 2,168,114 - +0.2 2,168,161 + -1.0 2,168,161 + -0.2 2,168,161 + -0.4 2,168,161 + +0.2 2,168,162 - +0.6 2,168,162 - -1.2 2,168,162 - +0.4 2,168,162 - -2.3 2,168,162 - -0.1 2,168,162 - +0.6 2,168,162 - -0.7 2,168,162 - +1.8 2,168,162 - -0.5 2,168,162 - -0.7 2,168,162 - +0.3 2,168,419 - ABZR86_RS09755 0.41 -0.2 2,168,693 + +0.4 2,168,694 - +0.5 2,168,694 - +0.5 2,168,694 - -0.8 2,168,729 + +1.0 2,168,730 - -0.4 2,168,730 - -0.4 2,168,730 - -0.3 2,168,942 + ABZR86_RS09760 0.26 +0.2 2,168,942 + ABZR86_RS09760 0.26 +0.7 2,168,943 - ABZR86_RS09760 0.26 +0.5 2,168,943 - ABZR86_RS09760 0.26 -0.2 2,168,996 + ABZR86_RS09760 0.40 -1.1 2,169,004 + ABZR86_RS09760 0.42 +0.0 2,169,004 + ABZR86_RS09760 0.42 -0.3 2,169,004 + ABZR86_RS09760 0.42 -0.6 2,169,005 - ABZR86_RS09760 0.42 +2.0 2,169,005 - ABZR86_RS09760 0.42 +1.2 2,169,005 - ABZR86_RS09760 0.42 -0.8 2,169,005 - ABZR86_RS09760 0.42 +0.6 2,169,173 + ABZR86_RS09760 0.84 -0.6 2,169,189 - ABZR86_RS09760 0.88 -0.5 2,169,189 - ABZR86_RS09760 0.88 +0.5 2,169,189 - ABZR86_RS09760 0.88 +1.6 2,169,189 - ABZR86_RS09760 0.88 -0.2 2,169,276 + +0.3 2,169,276 + -0.3 2,169,277 - +0.4 2,169,277 - +0.1 2,169,277 - +0.9 2,169,297 + -0.6 2,169,328 - +0.5 2,169,556 - ABZR86_RS09765 0.21 -0.5 2,169,558 + ABZR86_RS09765 0.21 -1.7 2,169,558 + ABZR86_RS09765 0.21 +1.0 2,169,558 + ABZR86_RS09765 0.21 +0.4 2,169,559 - ABZR86_RS09765 0.21 +0.4 2,169,628 + ABZR86_RS09765 0.29 +0.1 2,169,628 + ABZR86_RS09765 0.29 +0.6 2,169,628 + ABZR86_RS09765 0.29 +1.1 2,169,629 - ABZR86_RS09765 0.29 +0.5 2,169,714 + ABZR86_RS09765 0.38 +0.3 2,169,833 + ABZR86_RS09765 0.51 +0.4 2,169,858 + ABZR86_RS09765 0.54 +0.5 2,169,858 + ABZR86_RS09765 0.54 +0.9 2,169,858 + ABZR86_RS09765 0.54 -0.1 2,169,858 + ABZR86_RS09765 0.54 -1.9 2,169,859 - ABZR86_RS09765 0.54 -0.6 2,169,859 - ABZR86_RS09765 0.54 -0.4 2,169,859 - ABZR86_RS09765 0.54 +0.8 2,169,874 - ABZR86_RS09765 0.56 -1.2 2,169,943 - ABZR86_RS09765 0.63 +0.1 2,169,943 - ABZR86_RS09765 0.63 +0.4 2,169,943 - ABZR86_RS09765 0.63 +0.1 2,169,943 - ABZR86_RS09765 0.63 -0.1 2,169,943 - ABZR86_RS09765 0.63 -0.0 2,169,975 + ABZR86_RS09765 0.67 -1.7 2,169,975 + ABZR86_RS09765 0.67 +1.0 2,169,975 + ABZR86_RS09765 0.67 -0.5 2,169,976 - ABZR86_RS09765 0.67 -3.4 2,170,003 + ABZR86_RS09765 0.70 +0.3 2,170,050 + ABZR86_RS09765 0.75 -0.5 2,170,050 + ABZR86_RS09765 0.75 +0.6 2,170,050 + ABZR86_RS09765 0.75 -0.1 2,170,050 + ABZR86_RS09765 0.75 +0.5 2,170,051 - ABZR86_RS09765 0.75 +0.6 2,170,051 - ABZR86_RS09765 0.75 -1.0 2,170,098 + ABZR86_RS09765 0.80 -0.5 2,170,099 - ABZR86_RS09765 0.80 -1.4 2,170,099 - ABZR86_RS09765 0.80 +0.2 2,170,099 - ABZR86_RS09765 0.80 -0.5 2,170,099 - ABZR86_RS09765 0.80 +0.2 2,170,099 - ABZR86_RS09765 0.80 -0.3 2,170,099 - ABZR86_RS09765 0.80 +0.3 2,170,099 - ABZR86_RS09765 0.80 -0.2 2,170,177 - ABZR86_RS09765 0.89 +0.6 2,170,204 + +0.0 2,170,204 + +0.4 2,170,204 + -0.3 2,170,204 + +0.7 2,170,205 - -0.9 2,170,205 - +0.2 2,170,205 - -0.6 2,170,205 - -0.4
Or see this region's nucleotide sequence