Experiment: MoYLS4 with Vancomycin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3143 and DvMF_3144 are separated by 131 nucleotides DvMF_3144 and DvMF_3145 are separated by 323 nucleotides
DvMF_3143: DvMF_3143 - glycosyl transferase family 2 (RefSeq), at 3,963,731 to 3,965,530
_3143
DvMF_3144: DvMF_3144 - glycosyl transferase family 2 (RefSeq), at 3,965,662 to 3,967,359
_3144
DvMF_3145: DvMF_3145 - tRNA (uracil-5-)-methyltransferase Gid (RefSeq), at 3,967,683 to 3,969,020
_3145
Position (kb)
3965
3966
3967
3968 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3964.680 kb on - strand, within DvMF_3143 at 3964.694 kb on + strand, within DvMF_3143 at 3964.752 kb on + strand, within DvMF_3143 at 3964.792 kb on - strand, within DvMF_3143 at 3964.877 kb on + strand, within DvMF_3143 at 3964.941 kb on + strand, within DvMF_3143 at 3964.942 kb on - strand, within DvMF_3143 at 3965.076 kb on + strand, within DvMF_3143 at 3965.084 kb on - strand, within DvMF_3143 at 3965.236 kb on - strand, within DvMF_3143 at 3965.283 kb on + strand, within DvMF_3143 at 3965.735 kb on - strand at 3965.735 kb on - strand at 3965.972 kb on + strand, within DvMF_3144 at 3965.980 kb on - strand, within DvMF_3144 at 3966.276 kb on + strand, within DvMF_3144 at 3966.334 kb on + strand, within DvMF_3144 at 3966.548 kb on + strand, within DvMF_3144 at 3966.773 kb on + strand, within DvMF_3144 at 3966.871 kb on - strand, within DvMF_3144 at 3966.887 kb on - strand, within DvMF_3144 at 3967.074 kb on - strand, within DvMF_3144 at 3967.076 kb on - strand, within DvMF_3144 at 3967.093 kb on - strand, within DvMF_3144 at 3967.137 kb on + strand, within DvMF_3144 at 3967.268 kb on - strand at 3968.018 kb on + strand, within DvMF_3145 at 3968.172 kb on + strand, within DvMF_3145 at 3968.172 kb on + strand, within DvMF_3145 at 3968.218 kb on + strand, within DvMF_3145 at 3968.248 kb on + strand, within DvMF_3145 at 3968.268 kb on - strand, within DvMF_3145
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Vancomycin 1 mg/ml remove 3,964,680 - DvMF_3143 0.53 -0.2 3,964,694 + DvMF_3143 0.54 -0.3 3,964,752 + DvMF_3143 0.57 +0.2 3,964,792 - DvMF_3143 0.59 +0.5 3,964,877 + DvMF_3143 0.64 +0.1 3,964,941 + DvMF_3143 0.67 -0.4 3,964,942 - DvMF_3143 0.67 -0.4 3,965,076 + DvMF_3143 0.75 -0.0 3,965,084 - DvMF_3143 0.75 +0.6 3,965,236 - DvMF_3143 0.84 -0.8 3,965,283 + DvMF_3143 0.86 -0.5 3,965,735 - -1.1 3,965,735 - -0.0 3,965,972 + DvMF_3144 0.18 -0.9 3,965,980 - DvMF_3144 0.19 -2.9 3,966,276 + DvMF_3144 0.36 -2.1 3,966,334 + DvMF_3144 0.40 -0.8 3,966,548 + DvMF_3144 0.52 -0.2 3,966,773 + DvMF_3144 0.65 -0.5 3,966,871 - DvMF_3144 0.71 -2.4 3,966,887 - DvMF_3144 0.72 +0.8 3,967,074 - DvMF_3144 0.83 -0.5 3,967,076 - DvMF_3144 0.83 -1.1 3,967,093 - DvMF_3144 0.84 +1.9 3,967,137 + DvMF_3144 0.87 +0.2 3,967,268 - -0.1 3,968,018 + DvMF_3145 0.25 -1.8 3,968,172 + DvMF_3145 0.37 -2.0 3,968,172 + DvMF_3145 0.37 -0.1 3,968,218 + DvMF_3145 0.40 -0.1 3,968,248 + DvMF_3145 0.42 -0.2 3,968,268 - DvMF_3145 0.44 -0.2
Or see this region's nucleotide sequence