Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2868
Experiment: MoYLS4 with Vancomycin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Vancomycin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,620,796 | - | -0.1 | |||
3,620,873 | - | -1.4 | |||
3,620,889 | - | -0.0 | |||
3,620,963 | - | +1.6 | |||
3,621,131 | - | DvMF_2867 | 0.38 | -0.3 | |
3,621,213 | - | DvMF_2867 | 0.52 | -0.7 | |
3,621,239 | + | DvMF_2867 | 0.57 | -1.0 | |
3,621,254 | - | DvMF_2867 | 0.59 | -0.3 | |
3,621,293 | + | DvMF_2867 | 0.66 | -0.4 | |
3,621,343 | - | DvMF_2867 | 0.75 | -3.2 | |
3,621,771 | + | DvMF_2868 | 0.30 | -1.6 | |
3,622,155 | + | DvMF_2869 | 0.22 | -1.8 | |
3,622,403 | + | DvMF_2869 | 0.70 | -0.3 | |
3,622,516 | - | -0.1 | |||
3,622,622 | + | +2.5 | |||
3,622,669 | + | -0.6 | |||
3,622,700 | - | -0.5 | |||
3,622,876 | + | -0.7 | |||
3,622,876 | + | -0.7 | |||
3,622,886 | - | +1.8 |
Or see this region's nucleotide sequence