Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2803
Experiment: MoYLS4 with Vancomycin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Vancomycin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,545,560 | + | DvMF_2802 | 0.15 | -1.1 | |
3,545,603 | + | DvMF_2802 | 0.23 | -0.6 | |
3,545,608 | + | DvMF_2802 | 0.24 | -1.7 | |
3,545,642 | - | DvMF_2802 | 0.30 | -0.8 | |
3,545,673 | + | DvMF_2802 | 0.36 | -0.3 | |
3,545,680 | + | DvMF_2802 | 0.37 | +1.1 | |
3,545,764 | + | DvMF_2802 | 0.52 | -1.0 | |
3,545,764 | + | DvMF_2802 | 0.52 | -0.5 | |
3,545,772 | - | DvMF_2802 | 0.54 | -0.9 | |
3,545,772 | - | DvMF_2802 | 0.54 | -1.0 | |
3,545,796 | + | DvMF_2802 | 0.58 | -0.3 | |
3,545,860 | + | DvMF_2802 | 0.70 | -0.8 | |
3,545,883 | + | DvMF_2802 | 0.74 | -1.4 | |
3,545,883 | + | DvMF_2802 | 0.74 | -0.7 | |
3,545,906 | - | DvMF_2802 | 0.78 | -0.8 | |
3,545,914 | - | DvMF_2802 | 0.79 | -1.2 | |
3,546,044 | + | -1.0 | |||
3,546,202 | - | DvMF_2803 | 0.24 | -0.1 | |
3,546,356 | - | -1.7 | |||
3,546,578 | + | -0.2 | |||
3,546,581 | - | +0.2 | |||
3,546,583 | + | -0.9 | |||
3,546,850 | + | DvMF_2804 | 0.29 | -1.7 | |
3,546,902 | + | DvMF_2804 | 0.32 | -0.6 | |
3,546,978 | + | DvMF_2804 | 0.38 | -1.5 | |
3,546,993 | + | DvMF_2804 | 0.39 | -1.4 | |
3,547,021 | - | DvMF_2804 | 0.41 | +0.5 |
Or see this region's nucleotide sequence